Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2450 ATGGAGCACAATTCCGTTGAACCGAGTTGTCTCGTGCCAGATTCTTTCACCGGCGATTCGTTCGACGGAGAAAGTGAACAGTTGGACAAGTTACAAGATCATAGTTGCCTTGCTGACGATGAAATACTAAGAGTTGGGATGCGGTTTGAGCATTTGAAGTTGGCCCAGGATTTTTATGCGACCTATGCAAAAAAAGTTGGTTTCATAAGTAAGATACGGGCCACAAATCTTGACAGGATGACAAAGCAACCGATCAACCAATCTATCCATTGCAATCGGGAGGGTTTCCGGGGGTCTCCTGTCAAAGCACCCATACGGAAGAACACAATGGTAGGTGTGGGATGCAGAGCAAGAATATATGCAAAGTTCGACAGGAAAAAGCATGATTGGGTCTTGTTGAAGGTTGAACTAAATCACTCGCACCCGTGTTCAACTAAGAAGGCAGTGCACTACCACGAGAACAGGGAGTTAACAATGCATGCGAAGTGTATCATTGAGGTTAATGATGAGGCGGGCATTCGACCCAACAAGACCTTTCTAGCATTAGCCAATGAAGTTGGTGGGCCTTCGAACTTGGGCTTTTCAGAGAAGGACGTCAGGAATTACATTTCATCAAGACTCCGATCCACAAGTGTCAACGCAGATGTCAAGGAGATGTTGAACTACTTCATGCAAATGAAGGAGTTGAATCCGAACTACTTTTACGCAGTGAATATAAATGAGGATAACAAGTTTACGAGTGCAGTTTGGGTGGATGCAAGGCATGGATTGCCGTTTGCTGCTTTCATTGGTGTGAACCACCATGGTAAGTCTACTTTGTTAGGCTGCGCTCTGCTAGGCAGTGAGGAGATCCCGAGTTTTGAGTGGGTGTTCACACAATGGCTGGAGTGCATGGGAACGGCACCGAAGGGCATCATCACAGACCAATGTAAGTCTATGTTTGGTGCAATTAAGAAGGTCATGCCCAATACACGACACCAGTGGTGCATATGGCATATAACAAAAAAGATACACAACAAGCTTGGAGGTTATTCTAGGTTCAAAGAGTTGAATGCTGAGTTGAATCACATTATATGGAACTCTAAGTCGGTTGAGGATTTCGAGGATCATTGGGCTGAGTTCATTGATGACTTCAACTTACATCACAACAGATGGCTATCAGATCTATTTGAGGACCGACACATGTGGGTGCCTATCTTTTTCAAGGGTCAATTCTGGGCTCCCATGAGGAGTATGCAGAGGAGTGAGGGGATGCATTCATTCTTTGGTGGATACTTAAATTGTAAGACTAGTTTGGTCCAGTTTGTCCACGAGTTTGACAATGTCCTAGGAACGAAGGAGCAGAAGGAATTGGAGGACGATGCTGCATACTCTAGAGGTCTAATCCCATGTTCAACTAGATCAGTCATCGAGAGACGATTTCAAAAAGAGTATACTAACGAGATGTTTAGGGATGTCCAAACGGAGTTTGGCAAGAAGGCTGATTGCACTATTCGTGCCGTGGATGAACAGGGTGACTCAGCTTGGGTAAAGGTGGAAGAGGAAATACTAGTCTAA 1557 0.4483 MEHNSVEPSCLVPDSFTGDSFDGESEQLDKLQDHSCLADDEILRVGMRFEHLKLAQDFYATYAKKVGFISKIRATNLDRMTKQPINQSIHCNREGFRGSPVKAPIRKNTMVGVGCRARIYAKFDRKKHDWVLLKVELNHSHPCSTKKAVHYHENRELTMHAKCIIEVNDEAGIRPNKTFLALANEVGGPSNLGFSEKDVRNYISSRLRSTSVNADVKEMLNYFMQMKELNPNYFYAVNINEDNKFTSAVWVDARHGLPFAAFIGVNHHGKSTLLGCALLGSEEIPSFEWVFTQWLECMGTAPKGIITDQCKSMFGAIKKVMPNTRHQWCIWHITKKIHNKLGGYSRFKELNAELNHIIWNSKSVEDFEDHWAEFIDDFNLHHNRWLSDLFEDRHMWVPIFFKGQFWAPMRSMQRSEGMHSFFGGYLNCKTSLVQFVHEFDNVLGTKEQKELEDDAAYSRGLIPCSTRSVIERRFQKEYTNEMFRDVQTEFGKKADCTIRAVDEQGDSAWVKVEEEILV* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2450 518 PANTHER OS03G0843700 PROTEIN 26 516 - -
Ahy16g2450 518 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 26 516 IPR031052 GO:0006355
Ahy16g2450 518 Pfam FAR1 DNA-binding domain 57 144 IPR004330 -
Ahy16g2450 518 Pfam MULE transposase domain 254 336 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2450 Ahy-Chr16 133053969 133056814 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy16g2450 MULE 3.60E-21 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2450 - - ahf:112757595 1083.55