Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2449 ATGGCCATCTCTTTAAACACTCCTCTTCCCTTCCGCTTCCTCTCAGGCTCACCACCCCCATTCCCCCTTTCTAATTTAACCCCAATTTCACCCTCACTCAACCATAATCGCCTGAGTTCTTCCAGGTTCAACTTCCCTGCACCAACAACCAACCTCCCCACCATCAACTGCGATTACACTGCTTTTGAAGTTAGAGATGTTAGCTATCAGCCTCCGGGGACTCAGCTTAAGCTACTGAATTCAGTTAGTTTCTCACTTCCGGAGAAAAGTTTTGGTCTAATTTTCGGACAAAGTGGAAGTGGGAAAACAACACTCTTGCAGCTTCTTGCAGGAATAAGCAAATCGACCACTGGATCCATTTACAGCCAAAAGTATGGAAATGATGGAAATCCTATCCAGCCTCCTGAGCCTTTGTCACCAGAAAGAGTTGGTATTGTCTTCCAGTTTCCTGAGAGGTATTTTTTAGCTGAAACTGTGCTTGATGAAGTCACTTTTGGGTGGCCAAGGCAAAAGGGTAGCTATCAATTGAGAGAAAATCTTGCTTTAGGGCTTCAAAGGGCAATTAACTGGGTTGGATTGAATGGGATATCATTGGACAAAAATCCTCATTCCCTTAGCGGCGGTTACAAACGGCGCCTTGCTTTGGCAATTCAATTAGTGCAAATCCCTGATCTATTGATATTGGATGAGCCTCTTGCTGGACTTGATTGGAAAGCACGCGCAGATGTTGTGAAGCTTTTAAAGCATCTAAAAAGGGAGTTAACTGTTCTTGTTGTCAGCCATGACTTGAGTTGA 795 0.4428 MAISLNTPLPFRFLSGSPPPFPLSNLTPISPSLNHNRLSSSRFNFPAPTTNLPTINCDYTAFEVRDVSYQPPGTQLKLLNSVSFSLPEKSFGLIFGQSGSGKTTLLQLLAGISKSTTGSIYSQKYGNDGNPIQPPEPLSPERVGIVFQFPERYFLAETVLDEVTFGWPRQKGSYQLRENLALGLQRAINWVGLNGISLDKNPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWKARADVVKLLKHLKRELTVLVVSHDLS* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2449 264 CDD ABC_cobalt_CbiO_domain1 63 264 IPR015856 GO:0005524|GO:0016020|GO:0055085
Ahy16g2449 264 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 264 IPR027417 -
Ahy16g2449 264 Gene3D - 54 264 IPR027417 -
Ahy16g2449 264 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 62 263 IPR003439 GO:0005524
Ahy16g2449 264 PANTHER ABC TRANSPORTER I FAMILY MEMBER 11, CHLOROPLASTIC 52 263 - -
Ahy16g2449 264 PANTHER HEAVY METAL TRANSPORTER 52 263 - -
Ahy16g2449 264 Pfam ABC transporter 79 232 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2449 Ahy-Chr16 133002607 133011900 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g2449 66 264 Calmodulin-binding Proteins AT2G36910 25.592 2.62e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2449 - - vun:114196181 392.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2449 16 133002607 133011900 Ahy16g2449 16 133002607 133011900 ECH