Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2417 ATGTCTTGTATCTATAAATTAACCCACACCCACTTTTCTCTGTCCTCACACACAAAACAACACTGCTCTTTGTCTCATCCTACAAATCCCTCTCTCTTCTTCTTCCAAAGGGGAGTTCCACTCAAACCCCCCTTCTTCTTCTTCTTCTTCTTTGAGATGGATAACAGGTTGGCCACAAACTCCTCTTATGCTTCTCTTAGATTGCCCGTTGGCTACAGATTCTGCCCCTCTGACGAGGTTTTTGTCTCTTGCTACCTCAAAAACAAGGCCCTTTCAAAAACATTGGATTTTGATGTTGTTCCTGTCTTCGATGTCTTCAACACTGAGCCCAAGAATCTCCCTTCAGGTGGAAAGGTGTTTCTGGAGACAAAGTACTTTTACTTTGATCTGAAAGAGCGTGTGTTTGAAGACAATAACAAGATTGAAGCAGGGAAAGGGCACTGGAAAAGGGTGGGGAAAGGGAATCAGGAGCTTCTAAATAACAACAACAAACTCATTGGGTTCAAGACCAAGTTTGTTTTTTGGAGGAAGAAGAACCGCACTCAATTTCTTAAAACTAAGTGGGTTATGTTTGAGTTCCGTGTTTTTCTCAACCCCTCTCAGATAATGTCGTCATGGGCTGGCTACAAAATATATCTGAAGAAGGATAAGAGGAGGAACAAGAAGGCAAAGTTTTCTTGCGAGGAAAGCAGTGATGATGAAGAAGAAGAAGCAGAAAGAGCAAGTGAAGTGAATTTTCCAGATGAGATAAGTGGAATTAACACAGGACCTCCTTCACCAACTTCATCTAATGAATCCTCTGTTACAAGTTAA 813 0.4157 MSCIYKLTHTHFSLSSHTKQHCSLSHPTNPSLFFFQRGVPLKPPFFFFFFFEMDNRLATNSSYASLRLPVGYRFCPSDEVFVSCYLKNKALSKTLDFDVVPVFDVFNTEPKNLPSGGKVFLETKYFYFDLKERVFEDNNKIEAGKGHWKRVGKGNQELLNNNNKLIGFKTKFVFWRKKNRTQFLKTKWVMFEFRVFLNPSQIMSSWAGYKIYLKKDKRRNKKAKFSCEESSDDEEEEAERASEVNFPDEISGINTGPPSPTSSNESSVTS* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2417 270 Pfam No apical meristem (NAM) protein 69 195 IPR003441 GO:0003677|GO:0006355
Ahy16g2417 270 Gene3D NAC domain 77 220 IPR036093 GO:0003677|GO:0006355
Ahy16g2417 270 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 68 222 - -
Ahy16g2417 270 ProSiteProfiles NAC domain profile. 68 214 IPR003441 GO:0003677|GO:0006355
Ahy16g2417 270 MobiDBLite consensus disorder prediction 219 270 - -
Ahy16g2417 270 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 68 222 - -
Ahy16g2417 270 MobiDBLite consensus disorder prediction 248 270 - -
Ahy16g2417 270 SUPERFAMILY NAC domain 59 214 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2417 Ahy-Chr16 131914479 131916195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g2417 53 215 NAC Transcription Factor Family AT5G13180 33.728 1.17e-21 89.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy16g2417 NAM 1.40E-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2417 - - aip:107604830 471.085