Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2416 ATGTCACCGGACAGCAGCAGTAGGATATTGATCAACCAAATATTGGAGCCAAGCGATTCCGAAGAGCAGAAGAAAAGCGGAACAGTAGGGTTTGCACCATCATCGCCTCTCCTTTGTCTCCTTCCCTCCCCCTTCTATCTCTCAAGGTTGGAAACACTAAACCCTCGATGCCGATGCTGGATCTCTAACTCCCCTGGTGTCCCCCATCTCTCTTGGTTTGCGACGTTGTTCTTCGGAAACGGTAGACTCTGGTTCCTGTTTATCCCTGTTGTGTGCTTTAACTTTGGGATGTCTGATAGTGTGTCGGATTTAGACAATGGTAGCATGTCAGAGTTGTTAGGCCAATGGACTGATGGTTGGAGCACCGATTCAAGGGACGAGGATGATTCGAACGGGTTGAAGGAACCGCTGACTGAGGAAGGGGATAGTGGTCCTACCAACAGTGAATACGAAGGCTGGGATGGTGGTGGAAGCAATATGCATGCCTCCGTAGAGCATAATGGAAACTCCAAGAATGTCATGGGTAAACAATTCAGCAGTCCAAACCCCTATGATTGCTTCTGTGGAGATTCTATTAAAGATGAGGAGGGGAGTATTGTCAGGAAGTTTTTCTACTGCAATCGGCAAGGACTGCGTGAAAAGAAGCACTACGAGAGAGTTGAGAGAAAAATGCCTCATAAACCGAAGACGAGCACAAATTGCAATGCCAAGATTGTGGTGTTTCTGGACAAAAGTTGTGGGAAGTGGCGGACGAAGACATTGGTCAAGGATCATAATCATGACTTGGCGCCCCAAGAGTTCACTAATGTAATGGCTCAACATAGGAAGATCACAGAAGGGCACAAAGCGCATATACATAGCATGCATGAAGCCGGGTTCCAGACAACTCAAATAACGGGCTTCTTTGCCCACATGTGTGGTGGATATCGCAATCTTAACTTTATACGTAAGGACTTGTATAATTATATGGATGGAGTTAGGCAATCCAAGATCGTAGAGGGAGATGCAGCCGCAACAACAAGCTACTTGAAGGACAAGGCTGAGTTGGATCCGATGGCAGTTGTGGAGTACTCTTATTGCGTTGAGAAGCACATTGGGCACCTATTTTGGTCAAATGGTCACATGCAATATGACTACGAATGCTTTGGTGATGTGTTAGCATTTGACTCGACGTACAGAAAAAACTTGTATAACAAATCTCTTGTGATATTTTCGAGCACCAACCATCACAAGCAGACAATTATTTTTGGGTTTGGTTTGCTAGAGGATGAGAAGATTTCGTCCTACAAATGGTTGGTAAGTAGCTTAATGAGGCACAAGGAGCCGAAAGTCGTTGTCACAGATGGTGATGAATTCATGCAAGAGGCCATTAGATGTGAATTTTCTAACGCAACACATAGACTATGCACCTGGAATCTTGCTCGAAATGCTGTTGTTAATATCAAGGACAAAGATTTTTGTGCTGCGTTTAAGACTGCTGTGTATGGTCGCTTTAATGTGGAAGAGTTTGACAGTTATTGGGTGGACATGGTCACGTCATTCAGTTTAGAGGACAATGATTAG 1563 0.4479 MSPDSSSRILINQILEPSDSEEQKKSGTVGFAPSSPLLCLLPSPFYLSRLETLNPRCRCWISNSPGVPHLSWFATLFFGNGRLWFLFIPVVCFNFGMSDSVSDLDNGSMSELLGQWTDGWSTDSRDEDDSNGLKEPLTEEGDSGPTNSEYEGWDGGGSNMHASVEHNGNSKNVMGKQFSSPNPYDCFCGDSIKDEEGSIVRKFFYCNRQGLREKKHYERVERKMPHKPKTSTNCNAKIVVFLDKSCGKWRTKTLVKDHNHDLAPQEFTNVMAQHRKITEGHKAHIHSMHEAGFQTTQITGFFAHMCGGYRNLNFIRKDLYNYMDGVRQSKIVEGDAAATTSYLKDKAELDPMAVVEYSYCVEKHIGHLFWSNGHMQYDYECFGDVLAFDSTYRKNLYNKSLVIFSSTNHHKQTIIFGFGLLEDEKISSYKWLVSSLMRHKEPKVVVTDGDEFMQEAIRCEFSNATHRLCTWNLARNAVVNIKDKDFCAAFKTAVYGRFNVEEFDSYWVDMVTSFSLEDND* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2416 520 MobiDBLite consensus disorder prediction 118 175 - -
Ahy16g2416 520 PANTHER OS02G0262500 PROTEIN 208 511 - -
Ahy16g2416 520 MobiDBLite consensus disorder prediction 121 136 - -
Ahy16g2416 520 Pfam MULE transposase domain 385 476 IPR018289 -
Ahy16g2416 520 Pfam FAR1 DNA-binding domain 194 263 IPR004330 -
Ahy16g2416 520 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 208 511 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2416 Ahy-Chr16 131899939 131902293 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy16g2416 MULE 7.20E-21 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2416 - - aip:107610720 702.975