Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2413 ATGGGAGACCCAACAGCCGTATACGAGTTCTTGAACCCAACTTGTGATTCTTCTTCAAAAGAATCATCTCCTCCTTCTTCAAAGAGACCACAACAACAGCAACTAACTCAACCGTTTCACCAACAACCACCTTCTAGAACATTCCAATGCCATTTCTGTAACCGCAAGTTCTACACATCACAAGCCCTCGGCGGCCATCAGAACGCTCACAAGCTCGAACGAGCTGCCGCTAGAAGAACCGCCGTAACGGTCACTCTCCAACCACCACCACCACCGCCGCCGCCGCCACAACACTCGCTCTTTCCGTCCATGGAGTCTTCTCCTCCGTTCTTTCTCAGAAACAGCAACGATCTCAACAACAACAAGGCGGCTATGGTTGCCGCTGCCATGGCTATGCCTCAACATGAAATGGAAGTCGCTGATCATCACGGCGGCGCTGGCGGTGGCCGTTTCTTTGGAAACCCTTACTGGCTTGAAATGGATCCTCCGCCACCATTGCAGCAGTTTCAGCAGCAGCATCAGCAAATGAATCATCATCATCATCATCATCATCATCATGCTCCTTCTTCTTCACTGGGATTCTTCCATGGCGGTGGTGAAGGTGGTTCTTCCGGATCTTCATCTTCCACTTCTACTACTACCAATCCCCCTCAGTATCAGTATCATGTTGTTTCACATAACAATAACGCTTCTGGTTCTGCTGCTCCAGCTTCTTCTTCTGATGCTTCCGATAACGTTAACCTCGACCTCACACTTCGCTTATGA 765 0.4967 MGDPTAVYEFLNPTCDSSSKESSPPSSKRPQQQQLTQPFHQQPPSRTFQCHFCNRKFYTSQALGGHQNAHKLERAAARRTAVTVTLQPPPPPPPPPQHSLFPSMESSPPFFLRNSNDLNNNKAAMVAAAMAMPQHEMEVADHHGGAGGGRFFGNPYWLEMDPPPPLQQFQQQHQQMNHHHHHHHHHAPSSSLGFFHGGGEGGSSGSSSSTSTTTNPPQYQYHVVSHNNNASGSAAPASSSDASDNVNLDLTLRL* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2413 254 Gene3D Classic Zinc Finger 25 87 - -
Ahy16g2413 254 MobiDBLite consensus disorder prediction 175 189 - -
Ahy16g2413 254 MobiDBLite consensus disorder prediction 11 46 - -
Ahy16g2413 254 ProSitePatterns Zinc finger C2H2 type domain signature. 50 70 IPR013087 -
Ahy16g2413 254 SUPERFAMILY beta-beta-alpha zinc fingers 45 75 IPR036236 -
Ahy16g2413 254 PANTHER ZINC FINGER PROTEIN JAGGED 16 254 IPR045320 GO:0003700
Ahy16g2413 254 ProSiteProfiles Zinc finger C2H2 type domain profile. 48 75 IPR013087 -
Ahy16g2413 254 MobiDBLite consensus disorder prediction 201 247 - -
Ahy16g2413 254 MobiDBLite consensus disorder prediction 159 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2413 Ahy-Chr16 131575593 131576700 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g2413 46 89 C2H2 Transcription Factor Family AT5G14010 68.182 1.33e-13 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2413 - - ahf:112759108 360.147