Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2409 CACCTGCACCCCCACTCCCTTCTCTTCCCTTTCCCTCGAAGAAGGCCTGGGCCATTTGAGCCCATCTGGAAGACATGGACAAGGAGGCTCTCGGGACTCAAGGACGGGACCACAACTGCCATCTACCGCACTCGGATTGCGGTCACGAACGGGCTCTGGAAGAAGCTGAAGGAGCTGATGATGGAATTCCAGGGGCTGAGGCAAAGGATGATGACAGAGTACAAGGAGACTGTTGAAAGAAGGTACTTTACGGTGACCGGTGAGTACCCGGACGAAGAAGTGATCGAGAAGATCATTTCGAATGGTGAGGAAGAGGAGTTCTTGGGGAAGGCGATTGGGGAGCATGGGATGGGAAAAGTGATGGAAACCGTGGTTGAGATTCAGGACAGGCACGATGCGGCGAAAGAGATCGAGAAGAGCTTGCTTGAGTTGCATCAGGTGGAACCCTCGGACAAACCCTTCGGAGAAACGCGCCGGAACCCTCCGCCACACCTTCAAGGATCTCCGGTGCCGATCGCTGCTGCCACTCCGTCAACCCAGGGCATCGCAAGCATCTGCTCCCCCTTCACAGAGGTGCCGTCCTTGGCGCCGATACTTGTTGTCAGATCTGCCGCTGCTTCGTCCTCGATCGGATTTGTTCCCCGCCCGGACGACCACCGGCATCCAAAGGTTGCGTGCCGGCATACATGTAAGCTGGTCCCTGAATCAGGAAATCTGATTGCAGAATTGAAATTCGGGTTGCTTGTGTGTTCAAATCGATTGAACTTGTTCATGGAAGAAGATATCTCTGATGCGGATGCAGTTTTGTTCAAATCTGGTTTGAAGTTTGGCATGAATTTTGTTGTTGTTTTTGAAATTGTGACACCGCATATTTGTAACTATAACTTGACAATGAGGATTGTTGAATTGTTGTTTGAACTGCCATTCTGTTGA 933 0.5155 HLHPHSLLFPFPRRRPGPFEPIWKTWTRRLSGLKDGTTTAIYRTRIAVTNGLWKKLKELMMEFQGLRQRMMTEYKETVERRYFTVTGEYPDEEVIEKIISNGEEEEFLGKAIGEHGMGKVMETVVEIQDRHDAAKEIEKSLLELHQVEPSDKPFGETRRNPPPHLQGSPVPIAAATPSTQGIASICSPFTEVPSLAPILVVRSAAASSSIGFVPRPDDHRHPKVACRHTCKLVPESGNLIAELKFGLLVCSNRLNLFMEEDISDADAVLFKSGLKFGMNFVVVFEIVTPHICNYNLTMRIVELLFELPFC* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2409 310 PANTHER SYNTAXIN 26 147 IPR045242 -
Ahy16g2409 310 Pfam Syntaxin 35 147 IPR006011 GO:0016020
Ahy16g2409 310 SUPERFAMILY t-snare proteins 33 147 IPR010989 GO:0016020|GO:0016192
Ahy16g2409 310 Gene3D - 22 147 - -
Ahy16g2409 310 PANTHER SYNTAXIN-RELATED PROTEIN KNOLLE 26 147 - -
Ahy16g2409 310 MobiDBLite consensus disorder prediction 146 170 - -
Ahy16g2409 310 CDD SynN 38 111 IPR006011 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2409 Ahy-Chr16 131400548 131401549 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g2409 28 147 SNARE and Associated Proteins AT1G08560 74.380 2.68e-54 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2409 K08486 - aip:107627854 297.36