Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2397 ATGTACAATAAAGAAAAGTCTAGTCTCTCTTCTCTCGCTACACACTCCCCCAACGAACCCAAGCCATTGACGTGCCTCCGCATCCGACGCCACGCCTCCGCAGCCGACGCCGCCGCCCTCTACCCCATCCGCCGAGCAGCCAGCCATCTTCTGAATTTGTTTTTTCTTCCCACTGCCGATTCAGTAGAACCGTGTAGTCCATCGAAGCCCACCGTGATCACCGTCACCACCGCATCATCTCCGGCTGATTCGACCAAAATACAGGGGAGAGTTGTGACTACCGCAATAGAATGTACGGACATTAATGAGTTTGGAAGTGATGACATGGATCTTGTTGATGAGTTACTGGATCACAGTTGCCTTGCCGAAGATGTAATACCAAGAGTTGGGATGCGGTTTAAGCATTTGAAGCTAGCCCAGGATTTTTATCCAACCTATGCAAAGAAAGTCGGTTTCATAAGCAAGATAAGGAATACAAATTATGACAGGATGACTAAGGAATCGATTAACCAATCTATTCATTGTAATCGGGAGGGTTTCCGTGGATCTCGTGTCAAAACACCCACACGGAAGAACACGATTGCAATTGTGGGGTGCAGAGCAAGAGTATATGCAAAGTTTGACAGGGAGAAGCAGGATTGGGTCTTGCTGAAGGTTGAGTTGAGGCACTCGTACCCATGTTCAACTAAAAAGGCGGTGCATTACCACGAGAATAGAGCGTTGACCATGCATGCGAAATGCATTATTGAGGTTAATGACGAGGTGGACATTCGACCCAACAAGACATTTCTAGCATTGGCTAACGAGGTTGGTGGGCCATCGAACCTGGGCTTCTCCGAGAAGGATGTCAGGAACTACATCTCATCAAGACTCCGAACCACTAATGTCAATGCTGATGTCAAGGAGATGCTGGATTACTTCGTGCAAATGAAGGAGATGAATCCGAACCTCTTCTACGTAGTAAATGTGGACGACGATTACAAATTTAGAAGTGCAGTTTGGGTGGATGCACGGTGCAAGGCTTCTTATGAATACTATGGAGACGTGGTGTCATTTGATACCACATACAGTACGAACCGGCATGGTTTGCCGTTCGCCTCTTTCGTCGGTGTGCACCACCATAGTAAGTCTACTTTGTTAGGTTGTGCTTTGCTAGGCAGTGAGGAGATCCCTAATTTCGAGTGGGTGTTCACGTAA 1197 0.4737 MYNKEKSSLSSLATHSPNEPKPLTCLRIRRHASAADAAALYPIRRAASHLLNLFFLPTADSVEPCSPSKPTVITVTTASSPADSTKIQGRVVTTAIECTDINEFGSDDMDLVDELLDHSCLAEDVIPRVGMRFKHLKLAQDFYPTYAKKVGFISKIRNTNYDRMTKESINQSIHCNREGFRGSRVKTPTRKNTIAIVGCRARVYAKFDREKQDWVLLKVELRHSYPCSTKKAVHYHENRALTMHAKCIIEVNDEVDIRPNKTFLALANEVGGPSNLGFSEKDVRNYISSRLRTTNVNADVKEMLDYFVQMKEMNPNLFYVVNVDDDYKFRSAVWVDARCKASYEYYGDVVSFDTTYSTNRHGLPFASFVGVHHHSKSTLLGCALLGSEEIPNFEWVFT* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2397 398 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 121 397 - -
Ahy16g2397 398 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 121 397 IPR031052 GO:0006355
Ahy16g2397 398 Pfam MULE transposase domain 349 398 IPR018289 -
Ahy16g2397 398 Pfam FAR1 DNA-binding domain 141 227 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2397 Ahy-Chr16 130769044 130771458 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy16g2397 FAR1 2.80E-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2397 - - ahf:112757560 802.742