Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2387 ATGGCTTTCTCAGCAGACTCTTCTCGCCGCAACTCCCTCATCCCTTCCTTCCTCTACTCTTCCTCCTCCTCCGCCAAAACCCTATCCTTCCAGAAGATTCTCACCTCCCCCTCCTCCTCTCCCGCCGCAGCACCTTCCGGCGGCAACGGTGGCGCCTTCATGATTCCCTCTCCCAGCGAGCCCGGCAAGATCGAGATGTACTCTCCGGCCTTCTACGCCGCCTGTACCGCCGGCGGAATCCTCAGCTGTGGTCTCACTCACATGGCCGTCACTCCTCTTGACCTCGTCAAGTGTAATATGCAGATTGACCCTGCCAAGTACAAGAGTATCTCCTCTGGTTTTGGAGTTCTGCTGAAGGAGCAGGGAGTCAGAGGCTTCTTCAGGGGATGGGTGCCAACTTTGCTTGGTTATAGTGCTCAAGGTGCTTGCAAGTTTGGATTTTATGAATTCTTCAAAAAGTACTACTCTGATCTGGCTGGCCCAGAATATGCAACCAAGTACAAGACCTTGATCTACCTTGCTGGTTCTGCATCTGCTGAGGTTATTGCTGATATTGCACTTTGCCCATTTGAGGCCGTGAAGGTCCGTGTTCAAACTCAGCCCGGCTTTGCTAGGGGTCTGGCTGATGGGTTGCCGAAGTTTGTCAGATCTGAAGGAACCTTGGGATTGTACAAGGGATTGGTGCCTCTGTGGGGACGACAAATTCCATACACAATGATGAAATTTGCTTCTTTTGAGACCATTGTGGAGATGATCTACAAGCATGCCATCCCCACACCAAAGAATGAGTGCAGCAAAAGTCTCCAACTCGGTGTGAGTTTTGCTGGTGGATATGTTGCGGGTGTGTTCTGTGCCATTGTGTCACATCCTGCCGATAACCTTGTCTCTTTCCTCAACAATGCCAAGGGAGCAACCGTTGGTGATGCTGTGCAGAAGCTTGGTTTGTGGGGTCTCTTCACCCGAGGTCTCCCACTGCGTATTGTTATGATTGGAACACTTACAGGAGCTCAATGGGGAATATATGATGCCTTCAAGGTCTTCGTGGGACTGCCAACCACTGGTGGTCCTGCTCCTTCTGCTGTTCCTACCCCCACCGGTGCTGAGCTTGCAAAGGCTTAG 1119 0.5183 MAFSADSSRRNSLIPSFLYSSSSSAKTLSFQKILTSPSSSPAAAPSGGNGGAFMIPSPSEPGKIEMYSPAFYAACTAGGILSCGLTHMAVTPLDLVKCNMQIDPAKYKSISSGFGVLLKEQGVRGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDLAGPEYATKYKTLIYLAGSASAEVIADIALCPFEAVKVRVQTQPGFARGLADGLPKFVRSEGTLGLYKGLVPLWGRQIPYTMMKFASFETIVEMIYKHAIPTPKNECSKSLQLGVSFAGGYVAGVFCAIVSHPADNLVSFLNNAKGATVGDAVQKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGPAPSAVPTPTGAELAKA* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2387 372 ProSiteProfiles Solute carrier (Solcar) repeat profile. 70 154 IPR018108 -
Ahy16g2387 372 SUPERFAMILY Mitochondrial carrier 73 343 IPR023395 -
Ahy16g2387 372 Pfam Mitochondrial carrier protein 73 156 IPR018108 -
Ahy16g2387 372 Pfam Mitochondrial carrier protein 170 255 IPR018108 -
Ahy16g2387 372 PANTHER MITOCHONDRIAL PHOSPHATE TRANSPORTER 6 363 - -
Ahy16g2387 372 Gene3D Mitochondrial carrier domain 52 162 IPR023395 -
Ahy16g2387 372 Gene3D Mitochondrial carrier domain 163 349 IPR023395 -
Ahy16g2387 372 ProSiteProfiles Solute carrier (Solcar) repeat profile. 167 251 IPR018108 -
Ahy16g2387 372 ProSiteProfiles Solute carrier (Solcar) repeat profile. 268 347 IPR018108 -
Ahy16g2387 372 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 6 363 IPR044677 GO:0005315|GO:1990547
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2387 Ahy-Chr16 130557166 130560376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g2387 7 368 Chloroplast and Mitochondria Gene Families AT5G14040 79.357 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2387 K15102 - gmx:548006 625.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2387 16 130557166 130560376 Ahy16g2387 16 130557166 130560376 ECH
Ahy16g2387 16 130557166 130560376 Ahy6g2046 6 99532430 99535652 hybridization
Ahy16g2387 16 130557166 130560376 Ahy20g3096 20 141629468 141632238 PCT
Ahy16g2387 16 130557166 130560376 Ahy10g2535 10 114869785 114872890 PCT
Ahy20g3096 20 141629468 141632238 Ahy16g2387 16 130557166 130560376 PCT
Ahy10g2535 10 114869785 114872890 Ahy16g2387 16 130557166 130560376 PCT