Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2380 ATGGAGATTTCAACCCCGGAAGGCGGATCGAATAGCACATTGATCACTTCTAACGAAGGCAATGAAGAATTGAGTGTCGGTGAAGTTGTTACTCAAGAGGGGTCTAAGGTCGACGAAATTACTGACGTCATGGTGACGAGAAAGGATGAGTTGGAATTGAGACACGAGTTTTCGAATCATAGTGGGATCATTGAAGAGGAAATCCCAGTCATAGGAATGTGTTTTGATTCGTTGCCTCTGGCACGGAAATTTTATGCAAATTATGCAAAGAAAGTTGGGTTCGTAACTAAATTCAGGAACACGAATTTTGACAAGACGTATAAGGAATCAAAGATACACATTAATCAATCTATTCATTACACGCGAGAAGGTTATCGGGAGTATCGGGTGAAGGCAGCAACTCAGGCAAACATAATTACAGCCACGAGATGCAGAGCAAGGATGTATTTCATGCTGGACAGAGAGAAGGAAAGTTGGATTGTGTCTAGATTAGAATTAAGGCATTCTCACCCCTCTTCGGCTAAGAAAGCGGTACACTATCATGAGTACAGGGAGTTGACGATGCATGCTAAGTGCGTCATTACGGATAACAACGAGGCTGGCATAAGACCAAATAACACGTATCTAGCACTGACAAACGCGGTTGGTGGGTCTTCAAACCTGAGTTTTTCAGAAAAGAATGTCAGAAATTACATCACAAGCAAACTCCGATGTGCTGATGACAATGCGGACTTTAAGGAGATGATGAATTATTTTGTTCGAATGAAAGAGATCAATCCCAACTTCTTTTATGCAATAGATGTTGACGATGCTAATAAGCATGGTCTACTGTTTGCATTCTTTGTCGGTGTAAACCACAATGGGAAGTCTACTATTCTTGGTTGTGCTTTACTTGGGAGCGAGGAGATCCCTAGTTTTGAGTGGGTGTTCATGCAATGGGTGAGATGCGCCGGGACTGCGCCAAGGAGGATCATCACTGACCAGTACAAGGCCATGGTCGGTGCTATTAGGAAGACCTTTATGCCAATCGACGAAAATGGGGTCCAATATTCTTCAAGAGTGAATTTTGGGCCGAGTGGTTTGGTCCAATTCGTCTATGAATATGACAATGTGCTTGGAAACAAGGAGCAGAAGGAGCTGGAAGATGATGCTGCGGACTCGAAAGGAGTCATCCCATGTATAGGGAGCACAGGCATTGGGAGACAATTTCAGCGGAAATACACCAGTAATATGTTCAGGGATGTTCAGCTGGAGGTAAGGAAAAAAATCGATTGCGTGGTTCGGTCAACTAAACAACAGGGTAATTCAATTTCTATTAAAGTGGATGAGCAGAAGATAGTTTGGGAGAAGACTGTTTACCGTACTTTCACAGTAGATTTTGACCCATTGAGTCAAGAGGTTTAG 1404 0.4302 MEISTPEGGSNSTLITSNEGNEELSVGEVVTQEGSKVDEITDVMVTRKDELELRHEFSNHSGIIEEEIPVIGMCFDSLPLARKFYANYAKKVGFVTKFRNTNFDKTYKESKIHINQSIHYTREGYREYRVKAATQANIITATRCRARMYFMLDREKESWIVSRLELRHSHPSSAKKAVHYHEYRELTMHAKCVITDNNEAGIRPNNTYLALTNAVGGSSNLSFSEKNVRNYITSKLRCADDNADFKEMMNYFVRMKEINPNFFYAIDVDDANKHGLLFAFFVGVNHNGKSTILGCALLGSEEIPSFEWVFMQWVRCAGTAPRRIITDQYKAMVGAIRKTFMPIDENGVQYSSRVNFGPSGLVQFVYEYDNVLGNKEQKELEDDAADSKGVIPCIGSTGIGRQFQRKYTSNMFRDVQLEVRKKIDCVVRSTKQQGNSISIKVDEQKIVWEKTVYRTFTVDFDPLSQEV* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2380 467 Pfam MULE transposase domain 272 340 IPR018289 -
Ahy16g2380 467 Pfam FAR1 DNA-binding domain 83 171 IPR004330 -
Ahy16g2380 467 MobiDBLite consensus disorder prediction 1 25 - -
Ahy16g2380 467 PANTHER OS03G0843700 PROTEIN 53 273 - -
Ahy16g2380 467 PANTHER OS03G0843700 PROTEIN 361 461 - -
Ahy16g2380 467 PANTHER OS03G0843700 PROTEIN 278 342 - -
Ahy16g2380 467 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 53 273 IPR031052 GO:0006355
Ahy16g2380 467 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 361 461 IPR031052 GO:0006355
Ahy16g2380 467 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 278 342 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2380 Ahy-Chr16 130384192 130386688 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy16g2380 FAR1 1.60E-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2380 - - aip:107627064 495.738