Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2377 ATGGACAGAGACATGCTTCCAGCAAGGTCTCATCCTCTTTCTTGGACGGAACCCTTACTTGCAGAAGACAGCACTGACATTGGAATTCCCATGAATGCCCCTCTCACTTCCTTCAAAACCATACCCCAGCCTCCTCCAATTACCATAAACCCCTTCCCCTTCCTCACTGCTAACACTAACGATAACAACTTCCTCACGCACCAAGGAATGGACACTTTTGCCCTCGAACACTCTTTCCCTACTCTCAAACCCTCCTTCTTCACCAACAACAACAATCCTTTTGATAATGCCTTCGATTTGGGACCTGACTCCGGTTTCTTCTTCTCCGGCAACCATTCTTCCAACTCCCCTCTTTTGATGGCTTTCTCTCAGCCTCTAATTGGCTCGGCTGACATGACTTCCGCTACTGAATTCCCGCCGGCGACGCGGTTGCTCCCGGCGGGGGGCGCCGACGATGATGCGGTGGCGCTGGGTGCTGGATTTGAAATGGAAGCGTTTGCGGCTTCTGGAAATGCTCTGTTTTCGAGCAGGGGAAAGGGGTTGAGGCCTCTTGAGGTGGCTCCGACGGTTGGTGCGCCTCCCACGCTCTTCCAGAAGCGTGCCGCGCTCCGGCGAGGCTCCGGCGGGGCTGAGAGTCTTGAAGCTTTGGGAATGGGGAGTTTGGAGAGGAAATGGGGAGAGGGGGAAGTTGAAGAAGGTAGCATTGAGGCTTCAGTGTGGAATTACGATTCTGATGAGAATGTTGAGAGTGGTAGTAAGGCTGTGGTGGTGGAGGAGAGTGGGAATCATAGCGGCGGAGGGAATGGGAATTTGAGCTTGAGTGGCGGTGTCAATGGTGGAGATCAGAAAGGGAAGAAGAAAGGGATGCCGGCGAAGAATCTCATGGCGGAGAGGCGGCGCAGGAAGAAGCTTAATGATAGGTTGTACATGCTTAGGTCTGTTGTGCCAAAGATTAGCAAGATGGATAGGGCTTCGATACTTGGGGATGCAATCGACTACTTGAGGGAGTTACTGCAGCGGATTAATGATCTTCACAATGAACTGGAGTCAACTCCACCTGGCTCTTCGCTGCAATCTTCCACCACCAGCCTTCAACCTTTGACACCCACGCCGCAAACCCTTCCGTGCCGGGTGAAGGAGGAACTGTATCCTGGCGTCTTGCCAAGCCCCAAAAACCAACCTGCAAAGGTGGAAGTTAGGGTGAGGGAAGGGAGAGCTGTCAACATTCATATGTTTTGTACTCGCCGACCAGGTCTTCTGCTCTCAACCATGCGGGCTCTGGATAACCTCGGATTAGATGTTCAGCAGGCTGTTATTAGCTGCTTCAATGGCTTTGCTTTAGACGTCTTCAGAGCCGAGCAATGCAGAGAAGGGCAGGATGTTCTTCCTGAGGAAATCAAAGCAGTGCTGCTGGATTCAGCAGGGATCCATGACATGATGTGA 1443 0.5239 MDRDMLPARSHPLSWTEPLLAEDSTDIGIPMNAPLTSFKTIPQPPPITINPFPFLTANTNDNNFLTHQGMDTFALEHSFPTLKPSFFTNNNNPFDNAFDLGPDSGFFFSGNHSSNSPLLMAFSQPLIGSADMTSATEFPPATRLLPAGGADDDAVALGAGFEMEAFAASGNALFSSRGKGLRPLEVAPTVGAPPTLFQKRAALRRGSGGAESLEALGMGSLERKWGEGEVEEGSIEASVWNYDSDENVESGSKAVVVEESGNHSGGGNGNLSLSGGVNGGDQKGKKKGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLRELLQRINDLHNELESTPPGSSLQSSTTSLQPLTPTPQTLPCRVKEELYPGVLPSPKNQPAKVEVRVREGRAVNIHMFCTRRPGLLLSTMRALDNLGLDVQQAVISCFNGFALDVFRAEQCREGQDVLPEEIKAVLLDSAGIHDMM* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2377 480 MobiDBLite consensus disorder prediction 346 371 - -
Ahy16g2377 480 Gene3D - 282 351 IPR036638 GO:0046983
Ahy16g2377 480 MobiDBLite consensus disorder prediction 258 292 - -
Ahy16g2377 480 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 288 337 IPR011598 GO:0046983
Ahy16g2377 480 CDD ACT_UUR-ACR-like 409 469 - -
Ahy16g2377 480 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 62 480 - -
Ahy16g2377 480 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 291 357 IPR036638 GO:0046983
Ahy16g2377 480 SMART finulus 294 343 IPR011598 GO:0046983
Ahy16g2377 480 Pfam Helix-loop-helix DNA-binding domain 295 337 IPR011598 GO:0046983
Ahy16g2377 480 PANTHER BHLH TRANSCRIPTIONAL FACTOR 62 480 - -
Ahy16g2377 480 MobiDBLite consensus disorder prediction 263 277 - -
Ahy16g2377 480 CDD bHLH_AtAMS_like 291 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2377 Ahy-Chr16 130208221 130212111 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g2377 52 453 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 55.245 7.50e-128 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy16g2377 HLH 3.70E-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2377 - - aip:107647300 798.505
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2377 16 130208221 130212111 Ahy16g2377 16 130208221 130212111 ECH
Ahy16g2377 16 130208221 130212111 Ahy6g2039 6 99270884 99279629 hybridization