Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2344 ATGTGTCGTTTTCTTGTTGTTGTTGTTGTTCTTCTTCTACAGTGTCTTCTCTTCAACACTTTCGCACTCACCGCTTCGGTTCCGAATAGTAACGACGCACTGTCCCTCCTCGCTTTCAAAAACTCCGTCTCCTCCGACCCCTCGAACCTTCTAGAACAATGGAACAACGCCACTTCCTCCACCTTCTGCAACTGGCGCGGCGTTACTTGCGGCGGTTCTGGCAGAGTCACTGCCCTCCGCGTGACCGGCCTCGGCGGCGGCCAATTGTCTCCCTCCCTCGGAGACTTGTACGGGCTTCGCGTCCTTTCCCTTCCCGGAAACATGTTTTGCGGCGAGATTTCGGCGATCCTTGGTAACCTCCGGCACCTCGAGGTTCTCGAGCTTCAACAGAACAACTTCTCAGGGAAGTTACCCTTTGAGATGAGTTACCTGCATTCTCTTCAACTCGTTAACCTCTCTGGTAATGCTCTCAGCGGTTCAATTCCGAGTTGTCTCGTTGGGAGCGTGAGAACCGTTGATTTGTCGAACAACCGGTTTTCTGGTAAGATCCCAGTAGATGGTTTAACCAACGGCTGTGATTCGCTGGACTACTTGAGGCTTTCGCACAACTTTTTGACCGGTGAGATTCCACGCCAGATTGGGAAATGTAGGAACTTGAGGTACCTTTTTCTCGATGGGAATATCTTGGAAGGTGGAATCCCAAATGAGATAGGTTACGCTTCTGAGCTTAGGGTTCTAGATGTTTCTAGAAACAGCCTCACCGGCAGGGTCCCCAAAGCGCTTGGCAGTTGCTTGAAGCTTTCGGTTATTTTGCTAACTGATTTGTCTGACGATGAGGAAGAAGAAAATGAGGGAAGCTTGGGTTATAATGATAGCTTTAGAGGAGAGTTCAATGCCTTTGTTGGGAATGTTCCTCACGAAGTTCTCTTGATTCCCAGGTTGCAGGTCTTTTGGGCGCCGAGGGCGAATCTCGCTGGACGTTTGCCTGGCCGAGGCTGGACGGATTCTTGCGCGCTGAGAGTGCTCAATTTGGGGCAGAATTATGTATCTGGCGTTGTGCCGGAGAGTTTGGGGATTTGTAGGAATTTGACCTTCTTGGACTTGAGTTCTAACAGTTTGGTTGGATATTTGCCTTCACAGCAGCTCAGGGTTCCTTGTATGGTGTACTTCAATGTCAGCAACAACAATATATCTGGCACACTTTCAGGGTTTGGGAACGGAAGCTGCGGTTCAACTGGCACCCCTACTGCAAAAGACCTTGAATTCCTTGAATGGGAAGGATACAATGGTACATACTTTAGTATTCCTGTTTGGAGATTTTTGAAGAATCCTCTACTTGGATCAGGTTTAGAAGACAATACTGTTATTAGCCATGATTTCAGCTGGAATAAGTTTGGTGGATTGTTACCTATGTTTTCTCTTGGAGATAATCTTTTTACTGCAAATCATAGAGTTTCTTACATGCTGTTTCTCAATAATAATGAGTTCAATGGGTCTTTATCAAACCAGCTTGTTTTGAACTGTAATGATCTTGAGGCATTGTCAGTTAACTTAAGTATGAACCATCTGTCAAATGAGGACTCGCCAGCATTACTGCTGGACTGTCTACGGTTGACAGTTTTCGAAGCAGCATACAACCAGATCAGTGGGTCAATTGGAAAGGATATAGGTCACTTGATGATGCTTCAGCGTCTTGATTTGAGTGGGAACAAACTATTTGGATCTTTGCCTGATGAATTAGGAAGCCTGAAAAACATGAAATTGATGCTTTTAGCAGGAAATAATCTCACCGGGGAAATTCCTTCCCAGCTTGGTCAATTGGCTTACCTTTCTGTTTTGAATCTTTCTCACAATGCTCTAGTGGGAACGATTCCAGCAAGTCTGTCAAATGCCACTAATCTTGAAATTCTGCTGCTAGATCACAATAAGCTTTTTGGGGAAATACCTTTATCCTTTTCAACACTTTCCAAACTTGTTCAGCTAGATGTTTCTTTCAATAATCTTTCAGGTCATATTCCTTACCTTCAGCATCCAAATGATTGTGGTTCCTATAAAGGGAATGAACACCTGCACTCTTGCCCTGATCCATACTCTGATTTGCCTGCTTCCCTTCCAGTCCCTCTTGAAGTCAAAAGTTTGCAGAGACACAGGAAATCAAGGACGTTGGTTATTGCCTTGGTGACTTCTGGTTCTCTAGTTATTTGCATACTTATGGGAATCGTATTGATGATCATTTTTGGGAGGAGTAAATTTGGTCGCCTCAGCAGTCTTAGAAGAAGACAGGTGGTGACTTTCCAGGATATTCCAACTGAATTGAGTTATGATGGTGTGGTCACCGCAACTGGAAATTTCAGCATTCGATATCTAATCGGCACAGGAGGTTTTGGGTCAACTTACAAGGCAGAACTGTCTCCTGGTTTTCTTGTTGCCATAAAGCGGTTGTCAATAGGTAGATTTCAAGGAATTCAGCAGTTTGAAACGGAAATAAGGACATTGGGTAGAATTCGGCACAAAAATCTTGTGACTCTTATTGGCTACTACGTAGGAGAGACAGAAATGTTCTTGATTTACAACTACCTCTCTGGCGGAAACCTTGAAGCCTTCATACATGACAGGTCAGGGAAAAAGGTGCAGTGGCCAGTTATTTACAAGATAGCGAAAGACATAGCAGAGGCCCTCGCTTACCTTCATTATTCTTGTGTTCCCCGCATAGTTCACCGCGATATCAAGCCTAGCAACATCTTACTCGATGAAGAACTTAATGCCTACCTGTCTGATTTCGGCTTGGCAAGATTGCTCGAGGTTTCTGAAACCCATGCCACCACTGATGTGGCAGGCACATTCGGTTATGTTGCTCCTGAATATGCCACCACTTGCAGGGTGTCTGACAAAGCAGATGTCTACAGCTTTGGTGTAGTGTTGTTAGAATTGTTGTCTGGAAGAAAGTCACTTGATCCATCATTTTCTGAATATGGGAATGGATTCAATATCGTACCATGGGCTGAGTTGTTGATAACCGAAGGTCGTTGTTCTGAGCTATTCTCATCTGCTTTGTGGGAAGCAGGTCCAAAGGATAAGTTGTTGTCACTTCTAAAGTTAGCACTAACATGCACAGTAGAAACACTTTCCATTCGGCCATCGATGAAGCAGGTTCTTGAGAAACTGAAACAACTGAAATGTTGA 3183 0.4467 MCRFLVVVVVLLLQCLLFNTFALTASVPNSNDALSLLAFKNSVSSDPSNLLEQWNNATSSTFCNWRGVTCGGSGRVTALRVTGLGGGQLSPSLGDLYGLRVLSLPGNMFCGEISAILGNLRHLEVLELQQNNFSGKLPFEMSYLHSLQLVNLSGNALSGSIPSCLVGSVRTVDLSNNRFSGKIPVDGLTNGCDSLDYLRLSHNFLTGEIPRQIGKCRNLRYLFLDGNILEGGIPNEIGYASELRVLDVSRNSLTGRVPKALGSCLKLSVILLTDLSDDEEEENEGSLGYNDSFRGEFNAFVGNVPHEVLLIPRLQVFWAPRANLAGRLPGRGWTDSCALRVLNLGQNYVSGVVPESLGICRNLTFLDLSSNSLVGYLPSQQLRVPCMVYFNVSNNNISGTLSGFGNGSCGSTGTPTAKDLEFLEWEGYNGTYFSIPVWRFLKNPLLGSGLEDNTVISHDFSWNKFGGLLPMFSLGDNLFTANHRVSYMLFLNNNEFNGSLSNQLVLNCNDLEALSVNLSMNHLSNEDSPALLLDCLRLTVFEAAYNQISGSIGKDIGHLMMLQRLDLSGNKLFGSLPDELGSLKNMKLMLLAGNNLTGEIPSQLGQLAYLSVLNLSHNALVGTIPASLSNATNLEILLLDHNKLFGEIPLSFSTLSKLVQLDVSFNNLSGHIPYLQHPNDCGSYKGNEHLHSCPDPYSDLPASLPVPLEVKSLQRHRKSRTLVIALVTSGSLVICILMGIVLMIIFGRSKFGRLSSLRRRQVVTFQDIPTELSYDGVVTATGNFSIRYLIGTGGFGSTYKAELSPGFLVAIKRLSIGRFQGIQQFETEIRTLGRIRHKNLVTLIGYYVGETEMFLIYNYLSGGNLEAFIHDRSGKKVQWPVIYKIAKDIAEALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELLSGRKSLDPSFSEYGNGFNIVPWAELLITEGRCSELFSSALWEAGPKDKLLSLLKLALTCTVETLSIRPSMKQVLEKLKQLKC* 1061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2344 1060 Pfam Leucine rich repeat 169 227 IPR001611 GO:0005515
Ahy16g2344 1060 ProSitePatterns Serine/Threonine protein kinases active-site signature. 904 916 IPR008271 GO:0004672|GO:0006468
Ahy16g2344 1060 Pfam Protein kinase domain 789 985 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g2344 1060 Pfam Leucine Rich Repeat 562 583 IPR001611 GO:0005515
Ahy16g2344 1060 Pfam Leucine Rich Repeat 243 264 IPR001611 GO:0005515
Ahy16g2344 1060 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 10 1059 - -
Ahy16g2344 1060 Gene3D Ribonuclease Inhibitor 25 85 IPR032675 -
Ahy16g2344 1060 ProSiteProfiles Protein kinase domain profile. 784 1058 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g2344 1060 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK2 10 1059 - -
Ahy16g2344 1060 Gene3D Transferase(Phosphotransferase) domain 1 860 1059 - -
Ahy16g2344 1060 SMART serkin_6 784 1059 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g2344 1060 Pfam Leucine rich repeat N-terminal domain 30 70 IPR013210 -
Ahy16g2344 1060 Gene3D Phosphorylase Kinase; domain 1 747 859 - -
Ahy16g2344 1060 CDD STKc_IRAK 790 1058 - -
Ahy16g2344 1060 SUPERFAMILY L domain-like 302 678 - -
Ahy16g2344 1060 SUPERFAMILY L domain-like 30 275 - -
Ahy16g2344 1060 Gene3D Ribonuclease Inhibitor 441 693 IPR032675 -
Ahy16g2344 1060 Gene3D Ribonuclease Inhibitor 86 277 IPR032675 -
Ahy16g2344 1060 Gene3D Ribonuclease Inhibitor 285 438 IPR032675 -
Ahy16g2344 1060 ProSitePatterns Protein kinases ATP-binding region signature. 790 812 IPR017441 GO:0005524
Ahy16g2344 1060 SUPERFAMILY Protein kinase-like (PK-like) 762 1055 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2344 Ahy-Chr16 129264809 129269511 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g2344 7 1059 Receptor kinase-like Gene Family AT3G02130 43.520 0.0 775
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XV Ahy16g2344 Pkinase 2.70E-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2344 - - gmx:100795047 1499.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2344 16 129264809 129269511 Ahy16g2344 16 129264809 129269511 ECH
Ahy16g2344 16 129264809 129269511 Ahy6g2012 6 98626173 98630944 hybridization