Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2342 ATGTCAAGTTCTCTTGCAGCAATATTAGGAGGAGCTGCAGGAGCCGTGGCATTGGCAGGGATTGTTATAATACTCATATGGTTTTGTATTTTTCGCAAGAGAAGCGTTTCGAGAACTTCAGAGACAGGATCCTCTGATCCTTCCCAAGTAGGACGACATGGCACAATTGAGTTGTCGATACGAGATACTAGGCGTTTTGAGATGGAGGAACTATCTGGGGCTACAAAGAGTTTCAGTGACAAGAATTTGATTGGAGAAGGGAAATTCGGGGAGGTTTATAAGGGTTTGCTTCAAGATGGTATGATTGTAGCAATCAAGAAGAGGCGTGGACTCGCGAGTCAGGAGTTTGTTGATGAGGTACGCTATCTCTCATCGATTCACCATCGGAATCTCGTAACTCTTTTAGGCTACTGCCAGGAAAACAACCTGCAGTTTCTTATATACGAATATGTGCCTAATGGAAGCGTCTCCAGTCACTTGTATGGTGCCAATCAACAATCGCGAGAGAAGCTAGAATTCAAGCATAGACTTTCAATAGCTCAAGGTGCAGCTAAAGGTTTGGCTCATCTTCACTCCTTGAGCCCCCGTTTGGTGCACAAGGATTTCAAAACAGCGAATGTACTTGTCGACGAAAACTTCATCGCTAAGGTTGCCGACGCAGGACTTCGTAATTTTTTGGGGAGAGTTGAGATTGCAGGACCATCCTCTCTAGTAGCCGCAGATGAGATATTTCTTGCACCCGAGGTGAGAGAATTCAGACGATTTTCGGAAAAGAGCGATGTATACAGCTTTGGAGTATTTTTGCTGGAATTGTTGAGTGGGAAGGAAGCAACAGAATCAGCATCTCTGGACTCTAGCTACAATCTAGTTGAATGGGTGCAAAATAATGAAGACCATGGCATGATGTCTAACATAATTGATCAAAGATTGGGAAGCACTTTCACTGCTGAAGGAATGGAAGAATTCATAATGCTGATGACAAGGTGTTTAGAATCTTCAAGTGAGAGAAGACCAGCCATGAGTTATGTGGTGATGGAACTTGACAGAATACTTGAGAAAGAAGTGAACTTGACAACAATCATGGGTGAAGCCACCCCAACAGTTACCCTTGGAAGCCAATTATTCAGACCAACAACAACATAA 1143 0.4348 MSSSLAAILGGAAGAVALAGIVIILIWFCIFRKRSVSRTSETGSSDPSQVGRHGTIELSIRDTRRFEMEELSGATKSFSDKNLIGEGKFGEVYKGLLQDGMIVAIKKRRGLASQEFVDEVRYLSSIHHRNLVTLLGYCQENNLQFLIYEYVPNGSVSSHLYGANQQSREKLEFKHRLSIAQGAAKGLAHLHSLSPRLVHKDFKTANVLVDENFIAKVADAGLRNFLGRVEIAGPSSLVAADEIFLAPEVREFRRFSEKSDVYSFGVFLLELLSGKEATESASLDSSYNLVEWVQNNEDHGMMSNIIDQRLGSTFTAEGMEEFIMLMTRCLESSSERRPAMSYVVMELDRILEKEVNLTTIMGEATPTVTLGSQLFRPTTT* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2342 380 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524
Ahy16g2342 380 Gene3D Phosphorylase Kinase; domain 1 41 150 - -
Ahy16g2342 380 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 1 378 - -
Ahy16g2342 380 Pfam Protein tyrosine and serine/threonine kinase 82 347 IPR001245 GO:0004672|GO:0006468
Ahy16g2342 380 SUPERFAMILY Protein kinase-like (PK-like) 57 347 IPR011009 -
Ahy16g2342 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Ahy16g2342 380 ProSiteProfiles Protein kinase domain profile. 78 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g2342 380 Gene3D Transferase(Phosphotransferase) domain 1 151 365 - -
Ahy16g2342 380 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2342 Ahy-Chr16 129170319 129175310 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g2342 4 373 Receptor kinase-like Gene Family AT3G46290 35.949 3.65e-64 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Ahy16g2342 PK_Tyr_Ser-Thr 2.00E-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2342 - - gmx:100305436 614.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2342 16 129170319 129175310 Ahy16g2342 16 129170319 129175310 ECH
Ahy16g2342 16 129170319 129175310 Ahy6g2010 6 98511660 98516665 hybridization