Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2338 ATGACCCCTCTCCAATTCTCCACCAGTTCATCTTCGTGGCGCCAGTTGCTCTCCATGGTTTGTAACGTTGCTGCCGTCTGCGACCCCTCCATTGCTGTTTCTCGAGATCACAAGCCGGAGCAAACGGACGAGAGACAAAGGATTGAAAATGCTGGAACCTGGAGAGTTGGTGGCGTTCTTGCCGTTTCTCATGCTTTCGGTGATAGACTTCTGAAACAGAAGAAAAAGTTGATAGCTCTCTCTACCAGTTTTTTATTTTTTTCAATTTGTCTCAAATGGGAAGCTGTTGCAATAATAAAGAAAATAGATGATGCAGAGAAGGCGGCAAAGAAGTTGATGCAAGAAGCATATCAGAGAGGTAGTTCCGACAACACTACTTGTGTTGTGGTTCGTTTCTTGACGAACCAAGGTGCTGCTTCTGGTACTAGCTCCGGCTAA 438 0.4566 MTPLQFSTSSSSWRQLLSMVCNVAAVCDPSIAVSRDHKPEQTDERQRIENAGTWRVGGVLAVSHAFGDRLLKQKKKLIALSTSFLFFSICLKWEAVAIIKKIDDAEKAAKKLMQEAYQRGSSDNTTCVVVRFLTNQGAASGTSSG* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2338 145 Coils Coil 95 115 - -
Ahy16g2338 145 ProSiteProfiles PPM-type phosphatase domain profile. 1 132 IPR001932 -
Ahy16g2338 145 PANTHER ALPHABET, ISOFORM E-RELATED 27 139 - -
Ahy16g2338 145 Gene3D - 86 144 IPR036457 -
Ahy16g2338 145 Gene3D - 20 83 IPR036457 -
Ahy16g2338 145 SUPERFAMILY PP2C-like 31 132 IPR036457 -
Ahy16g2338 145 Pfam Protein phosphatase 2C 30 76 IPR001932 -
Ahy16g2338 145 PANTHER PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE TYPE 2C 27 139 - -
Ahy16g2338 145 CDD PP2Cc 31 132 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2338 Ahy-Chr16 129025697 129026862 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g2338 19 144 PP2C-type Phosphatase Gene Family AT4G31750 52.288 1.00e-42 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2338 K17506 - gmx:100795017 142.124