Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2285 ATGCCCCCTTCCCCTCTTGGCCTAATCTCTTTCTCCACATGGCGACAAATTCCGTCAACCATAAAATCCCCCTCACTTCTCACCTCCCCAAAAATTTCAATCCTCTCTTCTTCCCTTTTCCTAGACTTTAGTTTGCTACACCAAACTTCTCTCTCCCTTCTGTTATTCTTATTATTCCTCACCAAGCCTATAACAAATATTTTGTTACACCAAATTATTAGGCTCTCAAAAATGGGATCACCGGAATCAAATTTGCCACCAGGTTTTAGGTTCCATCCAACCGATGAAGAACTCATTCTTCACTACCTTAGGAAGAAGGTAGCATCCATACCCTTACCTGTTTCCATCATCGCTGAGGTTGATATCTACAAATTGGATCCATGGGAATTACCAGCTAAGGCTGCGTTTGGTGAGAAAGAATGGTACTTCTTCAGTCCAAGAGACCGGAAGTACCCAAACGGTGCGAGGCCAAACAGGGCAGCTGCTTCAGGGTATTGGAAGGCTACGGGTACCGACAAGACCATAGTGGTGTCGCCGGCGGCCACAGTTACACGTAGAGTAGGCCAAGAGAGCAGCGTTGGTGTCAAGAAGGCTCTTGTTTTCTACAAAGGAAGGCCTCCAAAGGGTGTTAAAACCAATTGGATCATGCACGAATATCGTCTTGTAGACAACAATAGACCCATTAAGCTCAAAGATACCTCCATGAGATTGGATGACTGGGTTCTGTGCCGGATTTATAAGAAGTCGAAATTCTCAGTATCTTCACCGGAGGAATCACCGTCGAGTGAAGTTCAGGCTGCAGAAGAAAATGGTTTATTCAAGAACACCATTTTGAAGAGTCCAATTCCAACACTGTCGCCGTCGCCACCGCCGCCGCTGCCGCCGCAGCCACTTCTCTCTCAAAAATCTGTGTCATTCTCAAACCTCTTAGATGCCATGGACTACTCCATGCTCAGCACCATCTTATCTGAGAACAATAACAACAGCACCCTTGATCAGGAACAATACTCCCAGATCAACACCAACCAATTGAACCATTCATCGAACATGGAGAACACTAGTAACAGCAACATGATGCTGATGAGGTCAAAGCGCCAGATAGACGAGGAAACAACAACGGTGTTGCACCCATCAAAGAAGTTCCATCACCAACTTATGGGCTCTTCTTCTTGCAGCTTCCCTAATAACATTAACAACACAAACACTGCACAATACGAGAACCCGCAATGGAACTACCTTGTCAAGCAATCCTTCTTGAACCAGCACTTACTTCTCGCTCCTCATCTTCGATTTCAAGGATAA 1302 0.4547 MPPSPLGLISFSTWRQIPSTIKSPSLLTSPKISILSSSLFLDFSLLHQTSLSLLLFLLFLTKPITNILLHQIIRLSKMGSPESNLPPGFRFHPTDEELILHYLRKKVASIPLPVSIIAEVDIYKLDPWELPAKAAFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKTIVVSPAATVTRRVGQESSVGVKKALVFYKGRPPKGVKTNWIMHEYRLVDNNRPIKLKDTSMRLDDWVLCRIYKKSKFSVSSPEESPSSEVQAAEENGLFKNTILKSPIPTLSPSPPPPLPPQPLLSQKSVSFSNLLDAMDYSMLSTILSENNNNSTLDQEQYSQINTNQLNHSSNMENTSNSNMMLMRSKRQIDEETTTVLHPSKKFHHQLMGSSSCSFPNNINNTNTAQYENPQWNYLVKQSFLNQHLLLAPHLRFQG* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2285 433 ProSiteProfiles NAC domain profile. 85 248 IPR003441 GO:0003677|GO:0006355
Ahy16g2285 433 SUPERFAMILY NAC domain 75 248 IPR036093 GO:0003677|GO:0006355
Ahy16g2285 433 Pfam No apical meristem (NAM) protein 86 221 IPR003441 GO:0003677|GO:0006355
Ahy16g2285 433 Gene3D NAC domain 94 252 IPR036093 GO:0003677|GO:0006355
Ahy16g2285 433 PANTHER NAC TRANSCRIPTION FACTOR 56 79 373 - -
Ahy16g2285 433 PANTHER OS01G0104200 PROTEIN 79 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2285 Ahy-Chr16 126403235 126405384 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g2285 81 433 NAC Transcription Factor Family AT3G04070 49.041 9.35e-104 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy16g2285 NAM 1.40E-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2285 - - ahf:112754912 745.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2285 16 126403235 126405384 Ahy16g2285 16 126403235 126405384 ECH