Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2261 ATGCCAGAGTTGAGAAGTGGAGCTAGAAGGTCGAAACGGCTTGGTGATCTTCAGCCTGGTCCACTACCCGTTGATCAAGGAGAAAATTGGGTACAACCTGCTCAGAACAGAACTAGGAGGAGAGTTGGAGGTGGAAGAGGAAGAGGGGGTAATGCTACAGCTGTAGGCAAAGGGCCATCACCAGCTGTACCCACAAGGCGAACTGCAGCTGGTAGAGGCCGTGGAGCAAGATTGATTGATCTAGACCCTGAACCTTGTGAAGCCCTTCCAGAACCTGTTGGTTTGAGGGCTCCTGAACCTGTTTACAATCAGGTAGAGGTAGTGGCCAATAATAATATTGTGATGGAGGGTGGAAGTGCAGACAAGGTGGCTGGAGGAGCTGAGGAAGAAGCAAGCACCACCCCTGTCCCTGAGAGGGTACAAGTTGGTAACTCTCCTGTTTACAAGATAGAAAGGAAATTGGGTAAGGGTGGTTTTGGCCAAGTTTATGTTGGCAGAAGGATGAGTGGTGGTTCTGATCGAACTGGTCCTGATGCAATTGAGGTTGCATTAAAGTTTGAGCACAGAAACAGTAAAGGCTGCAATTATGGGCCTCCTTATGAATGGCAAGTCTACAGTACTCTGAATGGTTGTTATGGCATTCCCTGGGTTCATTACAAGGGTAGACAAGGAGATTTTTATATTCTGGTCATGGACATGCTTGGGCCCAGTCTTTGGGATGTATGGAACTCTCTTGGCCAATCGATGTCACCAAGTATGGTTGCTTGCATTGCAGTGGAGGCAATATCAATCCTTGAGAAGCTCCATTTAAAAGGCTTTGTGCATGGAGATGTAAAACCAGAAAACTTTTTGCTTGGTCAACCGGGAACGGCTGATGATAAGAAGTTATATCTCATTGATCTTGGTTTGGCATCGAGATGGAAGGATGCATCGTCTGGTCTACATGTTGATTATGATCAGAGACCTGATATATTTAGGGGAACAATAAGGTATGCAAGTGTACATGCACATTTAGGTAGGACTGGAAGCCGAAGGGATGATCTTGAGTCCCTTGCATACACGTTAATATTTCTCATAAAAGGGAGACTACCATGGCAGGGTTATCAGGGTGACAATAAAAGCTTTCTTGTTTGTAAGAAAAAGATGGCCACTTCTCCAGAGTTGATGTGCTGCTTTTGCCCTCCTCCATTTAAACAGTTCCTTGAGGCTGTTACGAACATGAGATTCGATGAGGAGCCAAATTATTCCAAGCTTATATCACTTTTTGATAGCTTAATTGAACCATGCACTCCATTGAGACCTATCCGAATTGATGGTGCTCTTAAGGTCGGTCAAAAACGAGGAAGGATGCTTATAAATCTGGAAGAAGATGAGCAGCCTAAGAAGAAAGTGCGACTAGGTAGTCCTGCAACGCAGTGGATATCAGTGTATAATGCACGCCGTCCCATGAAGCAGAGATATCACTATAATGTAGCAGACACTAGGCTCCGGCAACATGTGGACAAGGGTATTGAGGATGGGTTGTATATAAGCTGTGTTGCCTCTTCAGCGAATCTGTGGGCCCTAATTATGGATGCAGGAACGGGTTTTTCTTCTCAGGTATATGAGTTGTCACCAGCCTTCCTCCATAAGGATTGGATTATGGAGCAATGGGAGAAAAATTACTATATCAGTTCAATAGCTGGTGCAGTTAATGGAAGTTCTTTGGTTGTCATGTCCAAAGGGACTCCCTACACACAGCAGTCGTATAAAGTTAGCGAATCATTTCCTTTTAAATGGATAAACAAGAAGTGGAAAGAAGGATTCCATGTTACCTCTATGACTACTGCTGGCAATCGCTGGGGTGTTGTCATGTCCAGGAATGCAGGATATTCTGATCAGGTTGTGGAGCTCGACTTTTTGTATCCGAGCGAGGGAATACATCGTCGATGGGAGAGTGGTTACAGGATTACATCTATGGCTGCTACTGCTGATCAGGCTGCTTTCATACTTAGCATTCCAAAGCGAAAATTGCTTGATGAAACTCAAGAGACTTTGCGTACCTCTGCCTTCCCTAGCACGCATGTAAAGGAAAAATGGTCCAAGAATCTGTACATTGCTTCAATCTGTTACGGGCGGACAGTTTGCTAG 2130 0.4498 MPELRSGARRSKRLGDLQPGPLPVDQGENWVQPAQNRTRRRVGGGRGRGGNATAVGKGPSPAVPTRRTAAGRGRGARLIDLDPEPCEALPEPVGLRAPEPVYNQVEVVANNNIVMEGGSADKVAGGAEEEASTTPVPERVQVGNSPVYKIERKLGKGGFGQVYVGRRMSGGSDRTGPDAIEVALKFEHRNSKGCNYGPPYEWQVYSTLNGCYGIPWVHYKGRQGDFYILVMDMLGPSLWDVWNSLGQSMSPSMVACIAVEAISILEKLHLKGFVHGDVKPENFLLGQPGTADDKKLYLIDLGLASRWKDASSGLHVDYDQRPDIFRGTIRYASVHAHLGRTGSRRDDLESLAYTLIFLIKGRLPWQGYQGDNKSFLVCKKKMATSPELMCCFCPPPFKQFLEAVTNMRFDEEPNYSKLISLFDSLIEPCTPLRPIRIDGALKVGQKRGRMLINLEEDEQPKKKVRLGSPATQWISVYNARRPMKQRYHYNVADTRLRQHVDKGIEDGLYISCVASSANLWALIMDAGTGFSSQVYELSPAFLHKDWIMEQWEKNYYISSIAGAVNGSSLVVMSKGTPYTQQSYKVSESFPFKWINKKWKEGFHVTSMTTAGNRWGVVMSRNAGYSDQVVELDFLYPSEGIHRRWESGYRITSMAATADQAAFILSIPKRKLLDETQETLRTSAFPSTHVKEKWSKNLYIASICYGRTVC* 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2261 709 SUPERFAMILY Protein kinase-like (PK-like) 148 435 IPR011009 -
Ahy16g2261 709 ProSitePatterns Protein kinases ATP-binding region signature. 154 185 IPR017441 GO:0005524
Ahy16g2261 709 SMART serkin_6 148 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g2261 709 Gene3D Transferase(Phosphotransferase) domain 1 116 465 - -
Ahy16g2261 709 ProSiteProfiles Protein kinase domain profile. 148 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g2261 709 Pfam Protein kinase domain 148 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g2261 709 ProSitePatterns Serine/Threonine protein kinases active-site signature. 273 285 IPR008271 GO:0004672|GO:0006468
Ahy16g2261 709 CDD STKc_CK1 148 422 - -
Ahy16g2261 709 MobiDBLite consensus disorder prediction 1 71 - -
Ahy16g2261 709 PANTHER BNAA05G37270D PROTEIN 104 683 - -
Ahy16g2261 709 PANTHER CASEIN KINASE-RELATED 104 683 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2261 Ahy-Chr16 125319266 125326059 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g2261 108 308 EF-hand Containing Proteins AT5G66210 24.889 2.00e-07 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Ahy16g2261 Pkinase 1.10E-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2261 - - gmx:100801967 1375.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2261 16 125319266 125326059 Ahy16g2261 16 125319266 125326059 ECH