Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2247 ATGGCGGGGAAGGTGTCGAAGGCGGCCTTCGACGCTAAGATGTGGAAACTACTGAGGGACTACAGCCAGGTCCTGGTGGTTACCTCCGATAACGTCGGTTCCAACCAGATAAACGGCATTCGGAGGGGTTTGAAGGGCGATTCTGTGGTCGTGATGGGTAAGAACTCCATGATGAGACGCTCTTTCACGCTCCAAGCTCAGAGGACTGGAAACAAGTCTTTTCTCAACCTTATCCCTCTTCTTAGGGGAAATGTGGCTTTGATTTTCACGAAAGGGGATATGAAGGAGGTTAGCAATGAGGTTGCCAAGTTCAAGGTTGTTGATCCTCTTCTCATGTGCCCCAAGTACTTATCATATGAATCGTACCGCAATTGTTCCTACATGCAATCTGGACAGTTACCTTTGGGCCTCAAGTGTTGTAATCAGCAGTCGTCGCAGGATTCGGAGACCTTTCTTGTATGCTCAAAATTCACTCCGCACCAGCATTGTTTCATGCAGAGATCAAAACAGTTCTTGGCAATGAGTGTATGGTCTCCTCTTCTCCTTTTAGCTGGGAGCTTGTGA 564 0.4805 MAGKVSKAAFDAKMWKLLRDYSQVLVVTSDNVGSNQINGIRRGLKGDSVVVMGKNSMMRRSFTLQAQRTGNKSFLNLIPLLRGNVALIFTKGDMKEVSNEVAKFKVVDPLLMCPKYLSYESYRNCSYMQSGQLPLGLKCCNQQSSQDSETFLVCSKFTPHQHCFMQRSKQFLAMSVWSPLLLLAGSL* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2247 187 Pfam Ribosomal protein L10 6 104 IPR001790 -
Ahy16g2247 187 Gene3D - 4 118 IPR043141 -
Ahy16g2247 187 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 1 185 - -
Ahy16g2247 187 SUPERFAMILY Ribosomal protein L10-like 7 105 IPR043141 -
Ahy16g2247 187 PANTHER RIBOSOMAL PROTEIN L10P-RELATED 1 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2247 Ahy-Chr16 124587380 124589690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g2247 1 109 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 61.062 3.87e-43 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2247 K02941 - rcu:8270447 149.828