Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2240 ATGATCTCCCGCTACAGCATAGTCCAATCTCACCACCCTAATTTCACAATCTCATACCTGATTGACTCATGTGGTCTCTCTCCAGACACTGCTACTCTTACTTTCCAAAAGCTTCACCTTCAAAGACCAGACTCAGTTCTCACCCTTCTCAGGGAGCATGGTTTCATAGATACCCAGATTTCAAATCTCATCAGAAAACGCCCATTGCTCCTCTTAGCAAACCTAGATATCCTCTTGCCAAAGTTTCAATTTTTTCTCTCCATTGGGATTTCCAATACCAACCTCGCAAGAACCCTAACCGCTGACCCAACCCTTTTGACCCGGAGCTTGGAGAAACAGATCATACCCTCTTACAATTTCCTCAAGAGTGTGTTGATTTCTGATGAAAAGGTTGCAGCTTCATTGAAGCACACATCTTGGGTCTTCCTCGAAGATCACAAGAAGAACCTCGTACCAAACCTCAATCTCCTAAAAGAGATGGATGTTCCTGAATCATGTGTTACGCTGTTACTGACTCATTTTCCGGAGGCATTGATGCAGAAAAAGGAAAACTTTGCAAAGCTTTCTAAGGAGATTAAAGAAATGGGGTTTAATCCAAAAAAGACAACTTTTGTGTTGGCCATTCATGTGTTCTCAGGTGAGGGTAACAAATCCATATATAACCGCTGTTACGAGGTTTATAAGAGGTGGGGTTGGTCAGATGATGACATCCTTATGGCATTCAAGAAGCACCCACATTGTATGATACTTTCAGAGGATAAGATAATGAAGACAATGGATTACTTGGTGAATAAGATGGGTTGGCTTTCAGGGATGATTGTTAGGTGCCCAGTGGTGTTGTTTTTTAGCTTGGAGAAGAGAATTAAACTTAGGTGCTCTGTTGCTAAGGTTTTGTTGATGAAGGGATTGATTAAGAGGAAGTTGAGCTTGTCCACTTTGCCAGTTTCTTGGAGAAGTATGTGA 963 0.4185 MISRYSIVQSHHPNFTISYLIDSCGLSPDTATLTFQKLHLQRPDSVLTLLREHGFIDTQISNLIRKRPLLLLANLDILLPKFQFFLSIGISNTNLARTLTADPTLLTRSLEKQIIPSYNFLKSVLISDEKVAASLKHTSWVFLEDHKKNLVPNLNLLKEMDVPESCVTLLLTHFPEALMQKKENFAKLSKEIKEMGFNPKKTTFVLAIHVFSGEGNKSIYNRCYEVYKRWGWSDDDILMAFKKHPHCMILSEDKIMKTMDYLVNKMGWLSGMIVRCPVVLFFSLEKRIKLRCSVAKVLLMKGLIKRKLSLSTLPVSWRSM* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2240 320 Gene3D Transcription termination factor 3, mitochondrial 108 316 IPR038538 -
Ahy16g2240 320 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 8 312 - -
Ahy16g2240 320 Pfam mTERF 171 312 IPR003690 GO:0003690|GO:0006355
Ahy16g2240 320 Pfam mTERF 47 199 IPR003690 GO:0003690|GO:0006355
Ahy16g2240 320 PANTHER CGI-12 PROTEIN-RELATED 8 312 IPR003690 GO:0003690|GO:0006355
Ahy16g2240 320 SMART mt_12 270 301 IPR003690 GO:0003690|GO:0006355
Ahy16g2240 320 SMART mt_12 132 163 IPR003690 GO:0003690|GO:0006355
Ahy16g2240 320 SMART mt_12 168 198 IPR003690 GO:0003690|GO:0006355
Ahy16g2240 320 SMART mt_12 238 269 IPR003690 GO:0003690|GO:0006355
Ahy16g2240 320 SMART mt_12 96 127 IPR003690 GO:0003690|GO:0006355
Ahy16g2240 320 SMART mt_12 61 91 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2240 Ahy-Chr16 124381511 124382669 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Ahy16g2240 mTERF 1.80E-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2240 K15032 - qsu:112019279 424.861