Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2234 ATGGTGAGCATCCAATCTTCCTACACGGTGACCCCTTCAGAGCCCACACCAGAAGTGAGGCTCTTCTCCCTCTGCGAGCAAATCAAACTTCGCACACACGCTCCCTCCTTTTACGCCTACAACCCCACTAACTTCGACAAAATCAACATCCACAACCTCAGAGACGCTCTCAGCAAGGCCCTCTCCATCTACTACCCTTTCGCCGGCAGACTCTGCTGGACGCAGGGTGGTAGATGGGAGATCCATTGCAACGCTAAAGGAGCCTTGCTAATTGAAGCTTCCTGCAAAGGGAAGACACTCGAGGATCTTCGAGACTTTGTTCCCAACGGTTTGGTCACTCAGCTCATTCCCAACATCGATTATTCTGCTCCGCTTGAAGACACCCCGATCTTGGCGGTTCAGCTCACCAGATTCAGCTGCGGCGGCGTCACAGTCGGCGTCGCCATGTGCCGCGGCGCACTCGACGGAACTGGCGGTATGAGGTTCATAAACACGTGGGCCAAGCTCGCCAGAGGGGAACCTCTGGACGAATCTGATCAGTATCCTTGCCATGACCGTACGGAGCTGAACTCTCGGAAGATGAGTACGGGTTCGGAGTTCAGTGACCAGAATGGTCATGACCATTCTGAGTATGGAGCCCCGCCCCCATGGCTAGGTTCATTGGGAACCGAAGACGCTAAAGTCACCGTCGAAGTCATGAAGCTCACAGGGGAGCAAGTCAAGAAGCTCAAAATGAAAGCCACGTCTACCAACGGTAACGGTGAAATGACGAAACCCTTCTCGAGTTTCGAGGCCATTGCGGGGCATTTATGGAAGTCTGTTAGTAAAGCAAGATACGAAGGAAACAGTGCACAGCCAACCAGGCTAACGACTTTAGTTAACTGCAGGAACCGTCTAAAGCCGCCGCTTCCCCCGGTGTACGCGGGAAACGCAGCTTTCCCTACGACGACGCCTACTTGTACCTTTGGCGACCTTATAGAGAACCCTGTGGGGTTCGCGGCCGCCAAAGTGAAGGGGGCGATCGCCAAGGTGGATGACAAGTTCGTCAGATCCGCTCTTGAATACATTGATAATGTAAAAGACATGAACTTGATAAGGTACAATTTTCACTACCCTGCCAAGAGTGTTCATAAGGGACCTTCGAAAGGGAATCCGAACTTATTCGTAGTGAGTTGGATGAATTTCTCATATGAGCATGCTGATTTTGGTTGGGGTGTACCTTATTATTTTGGACCTGTGTATATGGATGCTGAGGGTAAAGCCTTTTGTCTCAACAAACCTAATGGTGATGGTATGGTACATGTGGCTATCTCTTTGGACTCGGCTCACATGCCTGCTTTCAAGAAAATCTTCTATGAGGACATATGA 1368 0.5088 MVSIQSSYTVTPSEPTPEVRLFSLCEQIKLRTHAPSFYAYNPTNFDKINIHNLRDALSKALSIYYPFAGRLCWTQGGRWEIHCNAKGALLIEASCKGKTLEDLRDFVPNGLVTQLIPNIDYSAPLEDTPILAVQLTRFSCGGVTVGVAMCRGALDGTGGMRFINTWAKLARGEPLDESDQYPCHDRTELNSRKMSTGSEFSDQNGHDHSEYGAPPPWLGSLGTEDAKVTVEVMKLTGEQVKKLKMKATSTNGNGEMTKPFSSFEAIAGHLWKSVSKARYEGNSAQPTRLTTLVNCRNRLKPPLPPVYAGNAAFPTTTPTCTFGDLIENPVGFAAAKVKGAIAKVDDKFVRSALEYIDNVKDMNLIRYNFHYPAKSVHKGPSKGNPNLFVVSWMNFSYEHADFGWGVPYYFGPVYMDAEGKAFCLNKPNGDGMVHVAISLDSAHMPAFKKIFYEDI* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2234 455 Pfam Transferase family 1 453 - -
Ahy16g2234 455 Gene3D - 1 206 IPR023213 -
Ahy16g2234 455 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 3 455 - -
Ahy16g2234 455 MobiDBLite consensus disorder prediction 175 192 - -
Ahy16g2234 455 MobiDBLite consensus disorder prediction 175 218 - -
Ahy16g2234 455 PANTHER SHIKIMATE O-HYDROXYCINNAMOYLTRANSFERASE-RELATED 3 455 - -
Ahy16g2234 455 Gene3D - 221 454 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2234 Ahy-Chr16 124096276 124097866 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g2234 2 453 Monolignol Biosynthesis Gene Families AT5G48930 37.908 7.35e-89 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2234 K13065 - gmx:100775549 573.933