Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2230 ATGGTAGTAACAATCGATCGTTCTTACACGATAACCCCCTCAGATTCCTCTTCCACTACAATAATCCCTTTGTCACACTGTGATCAAACCAAGCTTCCAAACCATGGATCCCAACTTTCTCTCTACACCACTTCTAATTCCTCTTCTTCAATGGAAAATCTCAGAGCCTCACTCAGCAAAGCCTTGAATCTCTACTACCCTTTAGCCGGTCGACTCAGATGGATCCATGGCGGTCGATTACAACTTCTCTGCAACTCAAAGGGCGTCACACTATTGGAAGCCACGTGTCACGATAATCATACAACCTTGGACATGCTTCTCGAAAACCTTGATAACAATGTTTTGTTGGAACAGTTTTTGCCCAAGGTTGACTATAGCGTTGACCGTATTGACGACATGCCGTTGATGGCGGCACAATTCACGAGGCTTCCGGGCAACGGCGTCGTTTTGGGGATGATTATTTGTCGTGCTGTGGTTGACGGAGCCGCTCTTGGGAATTTCATTTGTTCATGGTCAAAATTGGCGAGAGGTGAAGATTTGGATTCGAGTTTGGTTCCGTTTTACGATCGAGGGTTGTTGGATTCGCTTGGTGTGAGTGTGGGTCCAAGATTTGAACATGCTGAATTTCTAACACCGCCACTTTGGGAAGAACAAAAAGAAGAACCACAAGAGATTGAGCTTGCTACTGTTGTGTTAAAGCTCACCAAAGGCCAAGTTGAGATGCTTAAGAAGAAAGCTTATCATGATGGTGGTAAAGATGGCTTTGGCAATGGTTCAAACTCATCAACACTTTCTTCAAGTAGGCCTTACACTAGTTTTGAGGTCATAAGTGGTCACTTATGGAGGTGTATTTGCAAGGTGAAGAATGAGGGTAATTGGGGCCAGAAAACAAGGGTATGTGCATTGGTCAATTGCAGGAACAGATTTAAACCAAATCTTCCTCAAAGTTATTTTGGGAATGCAACATTTCCTACCGTGACACCAACATGTTGCTTCGATGATATTGTTCACAAGCCTCTAGGCTACGCCGTTCGGAACGTGAGGAAAGCGATTGAGCGAATGAATGATGAGTATGTAAGGTCTGCCATTGCTTACATTGCTAATCAGAAGGACATGAATTCATTGAGGGAGAAGTTGTATAATCTTGGAGGAGGAAAATCCAGGGTGAACCCGAATATTTATATTGTGAGTTGGGCTAACTTTCCTTTTTATGAAGCGGATTTCGGGTGGGGAAAGCCGGTTTGTTTGGTTCCGGGAAGCATAAATTCGGATGGGAAGGCTTTCATTATGAACAATGGAAGTGGTGATGGCTTCATTGTTGCTACTTGCTTGCAACAATCCGTTGTTGATGATCTGAAGAAGCTCTTTTATGAGGATATAGAGGAGGTATATCCTAACTCCAAATTGTGA 1410 0.4355 MVVTIDRSYTITPSDSSSTTIIPLSHCDQTKLPNHGSQLSLYTTSNSSSSMENLRASLSKALNLYYPLAGRLRWIHGGRLQLLCNSKGVTLLEATCHDNHTTLDMLLENLDNNVLLEQFLPKVDYSVDRIDDMPLMAAQFTRLPGNGVVLGMIICRAVVDGAALGNFICSWSKLARGEDLDSSLVPFYDRGLLDSLGVSVGPRFEHAEFLTPPLWEEQKEEPQEIELATVVLKLTKGQVEMLKKKAYHDGGKDGFGNGSNSSTLSSSRPYTSFEVISGHLWRCICKVKNEGNWGQKTRVCALVNCRNRFKPNLPQSYFGNATFPTVTPTCCFDDIVHKPLGYAVRNVRKAIERMNDEYVRSAIAYIANQKDMNSLREKLYNLGGGKSRVNPNIYIVSWANFPFYEADFGWGKPVCLVPGSINSDGKAFIMNNGSGDGFIVATCLQQSVVDDLKKLFYEDIEEVYPNSKL* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2230 469 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 462 - -
Ahy16g2230 469 Gene3D - 214 458 IPR023213 -
Ahy16g2230 469 PANTHER SHIKIMATE O-HYDROXYCINNAMOYLTRANSFERASE-RELATED 8 462 - -
Ahy16g2230 469 Gene3D - 1 210 IPR023213 -
Ahy16g2230 469 Pfam Transferase family 2 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2230 Ahy-Chr16 123877948 123880491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g2230 1 458 Monolignol Biosynthesis Gene Families AT5G48930 31.613 5.69e-68 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2230 K13065 - gmx:100819383 462.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2230 16 123877948 123880491 Ahy6g1899 6 93172328 93174738 hybridization