Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2180 ATGGAAAATATTTGTCAATTGCACTTTGCTGATCTTGGCTTGGCATTCGAATTTTATAATTCATATGCCAAGACGAGGGGCTTCAGTGTGCGAAAGAGTAGGAGTAGAATAGTTGATGGAAAAGTTAGAGAAAAAACATATGTTTGTTCTTGTGAAGGGTATAGATTAGAAAAATGGAACCATATGAAAAATCGAGTTAGGGAGCCAAAATCAGAGGCAAGATGTGGTTGTATGAGTAAACTTCATGTGATCTTCAATGCGGTAACTGAGAGTTGGGTAGTGAGAGATTTTTGTGATGAACACAACCATGAGCTTGTTGTTCCAAAGTTAGCAAGAATGTTAAGATCTCACAAGAAAATGACTGAGCCCGACATTAGTCAAATGAACCATATGAAAGAGGTGGGGATCAGCATGCCAAACATATTTGGGTCATTAGCTAGCCAGTGTGGTGGGTACGAGAACGTTAATTTTTCAATTAAGGATATGCACAATCAAGTTGCGAAGCAAAGAAGACAATTACCTGATGATTTAACCTCTGCAATGGCTTACCTGGAAACGCTAGCAGCAAGGGATCAAAACTTGTTCTATAGTGTTGAAAAGGGAAGAGAAGGAGTGTTTCGGCAAATTTTTTGGTGTGATGGCCGGTGTCAGTTGGATTACGATCTGTTCGGGGATGTGCTAGCATTTGACGCCACATATAAGAAGAATAGATACAGATTGCCGGTGGTAATATTCTCGGGAGTTAACCACCATAATCAAACCGTTGTATTTGGTGCTGCGATAGTTTCAAATGAGAGGAAAAGCACCTATGTGTGGTCACTAAAACAGCTTCTCATAGCAATGAAGGGAAAGACACTGACTTCAGTAATTACGGATGGTCATCCATCGATGGCTATCGCTATTCAGGAAGTGTTTCCGAATGCACATCATAGGTTATGTGCATGGCACTTGATGCGTAATGCAACAAGCAATATTCACAAACCTCAGTTTACGAAAATGTTTACAAAGTTAATGCTAGGTGATTACGAAGTTGGTGTGTTCGAACAAAAGTGGGAGGAAATGGTTGGATTCTTTGGAGTGGAAGATCGGGAATGGATAGTAGATATGTATGGGAAAAGAAACATGTGGGCTATCGCTCATATCCGAGAAAAATTCTTTGCTGGGTTTAGAACGACTTCGAGGCGTGAAAGTCTACATGCTGTCCTCAAAAGATATGTTAAATCACGCCATAATTTGACAGAATTTGTTCAACACTTCCAGCGTTGTTTGAGCTACATGCGGCACAGAGAGGATTTGGCAGACTTTAAATCATCAACTGGACAACCTGTGATGCAGACACACTTTCAACAATTAGAAAGGTCAGCAGCTACCATTTATACCCGACAAATTTTTGTGTTGTTCCGTTCAATGCTCCACAAGGCCAGCACATTAAAGGTAACATATGAAGAGGAAACGAGTTCTTGCAAGATTTATCAGGTGTCAAAATTTTACAAGCCTAACATGATATGGCATGTGTCTTTTCACGGAGAGCAAGATGAATTTAAATGCTCATGCATGAGAATGGCCTCGATAGGTATTCCATGTAGTCATATACTTGTTGTTTTGGGTTTTCTAGACATTGCAGAGCTACCAAAATCATTAGTGCTGCGAAGATGGACTAGAAAAGCGAAGGAAGGCATTAGTGGGTATGATGACATGGGCGGCTTGATGGAGGATTCCTTGGCTATCAGTCGGCGTGCATGTTTGGCACATTGGTATAAACAAATTATGAACGAAGGGTGCCTAAAAGGGGATCTTTTTAATGAATCACGAGATGCATTGGTAAATATACTTTCATGTATTAGGGCTCATAGCGGGGACAATAACATCATGGAGGGGCATGCGGAATACATGTATGAAGACCTTGCAAAGAATGGAAGTACTGAGATAGAGACCATAAGGAAGCCTAAGCATTACAGCTACTGTCGCAGGGGGGGCATAACATTGCTATGTGTTCCATGA 2001 0.4088 MENICQLHFADLGLAFEFYNSYAKTRGFSVRKSRSRIVDGKVREKTYVCSCEGYRLEKWNHMKNRVREPKSEARCGCMSKLHVIFNAVTESWVVRDFCDEHNHELVVPKLARMLRSHKKMTEPDISQMNHMKEVGISMPNIFGSLASQCGGYENVNFSIKDMHNQVAKQRRQLPDDLTSAMAYLETLAARDQNLFYSVEKGREGVFRQIFWCDGRCQLDYDLFGDVLAFDATYKKNRYRLPVVIFSGVNHHNQTVVFGAAIVSNERKSTYVWSLKQLLIAMKGKTLTSVITDGHPSMAIAIQEVFPNAHHRLCAWHLMRNATSNIHKPQFTKMFTKLMLGDYEVGVFEQKWEEMVGFFGVEDREWIVDMYGKRNMWAIAHIREKFFAGFRTTSRRESLHAVLKRYVKSRHNLTEFVQHFQRCLSYMRHREDLADFKSSTGQPVMQTHFQQLERSAATIYTRQIFVLFRSMLHKASTLKVTYEEETSSCKIYQVSKFYKPNMIWHVSFHGEQDEFKCSCMRMASIGIPCSHILVVLGFLDIAELPKSLVLRRWTRKAKEGISGYDDMGGLMEDSLAISRRACLAHWYKQIMNEGCLKGDLFNESRDALVNILSCIRAHSGDNNIMEGHAEYMYEDLAKNGSTEIETIRKPKHYSYCRRGGITLLCVP* 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2180 666 ProSiteProfiles Zinc finger SWIM-type profile. 503 539 IPR007527 GO:0008270
Ahy16g2180 666 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 14 645 IPR031052 GO:0006355
Ahy16g2180 666 Pfam FAR1 DNA-binding domain 17 106 IPR004330 -
Ahy16g2180 666 SMART 26again6 514 541 IPR006564 GO:0008270
Ahy16g2180 666 PANTHER OS02G0262500 PROTEIN 14 645 - -
Ahy16g2180 666 Pfam MULE transposase domain 226 320 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2180 Ahy-Chr16 121554845 121556845 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy16g2180 MULE 3.50E-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2180 - - aip:107647229 1373.99