Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2167 ATGTCTGAGCCACAAGGTGTTGCTGATCATGGCACCAATTCAGGAACACGGCGAAAAGGTGCGGCCACAAAGCGTGCCATGGCAGTGGCAGCAGCAGCAACGGTGCCTCCATGTGGGGCATGCAAGTTCTTGAGGAGGAAGTGCATCAGCGGCTGCATCTTTGCGCCCCATTTTGGCTCCGACCAAGGCGCCGCTCGCTTCGCGGCCGTGCACAAGGTGTTTGGTGCAAGCAACGTGTCGAAACTGTTGTTGCATATTCCGGTGAACCGCCGCCATGAGGCGGTGGTTACCATATCCTATGAGGCACAGGCAAGGCTGTCTGACCCGGTGTATGGTTGTGTGTCCACCATTCTTGCTTTGCAACAGCAGGTGGCATCATTGCAAGGGGAGCTTTCTATGGTGCAAAATCAGCTGATAAATTCTAGGTTTGCATATGCAAATGTTCTTCATCAGTGCACACAACAGCATCATCATCATCATCATCGTGATAATAATCAGCCAAACATGATCAATGTATCTTTATTACAACAACCAACATACTCCAACAATAATTCATCTGCTTCAACCAATAATAACCTTGTGAACATGAACACCTTCAATAATAATAATAATAACCATTCAGGTTTCGAGCTTGCAATGGAGGCGGCACCATCATCACCGCCACACAGCTTTGAGCCTCTTCGGTTGTCACAGGAAAATAATGACGAGGATGATGAGGAAGAGAGCATCATTATTCCACAACTATTCAACCATGAGATAGTGCTTCACCGTCAATGA 777 0.4775 MSEPQGVADHGTNSGTRRKGAATKRAMAVAAAATVPPCGACKFLRRKCISGCIFAPHFGSDQGAARFAAVHKVFGASNVSKLLLHIPVNRRHEAVVTISYEAQARLSDPVYGCVSTILALQQQVASLQGELSMVQNQLINSRFAYANVLHQCTQQHHHHHHRDNNQPNMINVSLLQQPTYSNNNSSASTNNNLVNMNTFNNNNNNHSGFELAMEAAPSSPPHSFEPLRLSQENNDEDDEEESIIIPQLFNHEIVLHRQ* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2167 258 MobiDBLite consensus disorder prediction 1 19 - -
Ahy16g2167 258 MobiDBLite consensus disorder prediction 214 238 - -
Ahy16g2167 258 PANTHER LOB DOMAIN CONTAINING PROTEIN 12 240 - -
Ahy16g2167 258 Pfam Lateral organ boundaries (LOB) domain 37 135 IPR004883 -
Ahy16g2167 258 MobiDBLite consensus disorder prediction 1 21 - -
Ahy16g2167 258 PANTHER LOB DOMAIN-CONTAINING PROTEIN 20 12 240 - -
Ahy16g2167 258 ProSiteProfiles LOB domain profile. 36 138 IPR004883 -
Ahy16g2167 258 Coils Coil 117 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2167 Ahy-Chr16 120700728 120702293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g2167 37 242 AS2 family AT3G03760 64.115 1.01e-75 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy16g2167 LOB 6.00E-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2167 - - ahf:112698228 421.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2167 16 120700728 120702293 Ahy6g1861 6 91189260 91190887 hybridization