Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2156 ATGTTCGAAATGGGGTCATGTAGCGGAACAGTGTCGGAATTCGAGATTGGAGGTGTTGAGCCAGTAGGTGGCCTTGGTGGAAGTGGTGAATGGCTTTGCGACACATTGGAAAGCTCGCTGGATATTGGAATGGAAGCAGAAGAGAAGGAGGGAGAACCGCTGGAGGATCGCGATGAAGAAGATAATGGCATCTCTGAACCAGTCATGTACAGTGCCGCAGAGATATTGGAAATGAAATTCAACAACCCTGATGAGGCATCCCATTTCTATGAACAATATAGCCGGGCGAAGGGTTTTGCCATGAGGCAGGGAAAGAAACTGAAAAATAAGAAGGGGGAAATAGTTCGGTACACGTATTTATGCAACAGAAAAGGTTTCAGAAACAAAAAATGGCTAGAGATGCAGGATCGAAAGCGGGAGCACAAGGTTGTCACGCGATGTGGGTGTTTGGCGGAGATGAGGATAAAGCCAAAAGGTGATAGCGGGATTTGGTATGTTTCACGCTTTGTAGATGATCATAACCACGATCTTCTACCTGCAAAGTTTGTGCCGTACCTGCCTTCGTACTGGAAGATTTCTGATGTCGATCTAGCCCATATGAACAGCTTGAGGCAAGTTGGGATTTCTATTCCAAAAATATATGAGTCAATTGCTGCGTAA 660 0.4561 MFEMGSCSGTVSEFEIGGVEPVGGLGGSGEWLCDTLESSLDIGMEAEEKEGEPLEDRDEEDNGISEPVMYSAAEILEMKFNNPDEASHFYEQYSRAKGFAMRQGKKLKNKKGEIVRYTYLCNRKGFRNKKWLEMQDRKREHKVVTRCGCLAEMRIKPKGDSGIWYVSRFVDDHNHDLLPAKFVPYLPSYWKISDVDLAHMNSLRQVGISIPKIYESIAA* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2156 219 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 59 181 - -
Ahy16g2156 219 Pfam FAR1 DNA-binding domain 88 179 IPR004330 -
Ahy16g2156 219 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 59 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2156 Ahy-Chr16 120299958 120303715 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy16g2156 FAR1 4.90E-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2156 - - aip:107647209 427.943