Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2138 ATGGATAACACCGCAGTTTCTGTCTCCAAACGCATGGGTTATTCCACCTTGTTGCTGAACGCGTCTTTCCTCATCGTCTTCTCTGTTTTCCTTGTTCTTCATGTCAACTCTCCTTCAGAACAGCTTCCTCTGAGAAAGTACCATTTTACCCTTGGTGACATTGATGAGAATGATGATTCTTGCAAGAGCTTTCACAGCCTCAGTGACAACGAAGCAAAGTGCTTGTACTTGAAATCCAATGACCCTTGTGTCACTGAGGGTTATGTTGATTATCTTTACCTTTTCTACTGCAAATTTGGGGATTTAGCTCTTTTTGGTCAAACCCTTTTGTTCCTTTGGCTATTGGTCTTGTTCTACCTTCTAGCTAACACTGCTTCTGAATACTTTTGCCCTTCCCTTGAGAGCCTCTCAAAATTGCTGAGATTGTCCCCAACAGTTGCTGGAGTAACCCTTCTTTCCCTTGGCAATGGTGCCTGTGATGTCTTTGCAACACTTGTTTCCTTCAATGGCAGTGGCACTGGAGGTATTGGATTCAACACTGTGCTTGGGGGTGCTTCCTTTGTGTCCTGCGTTGTGGTTGGGATTGTTAGCATATCGGTTAGGCATCGAGGAATTCGAGTTAAGAAGTCTGCATTGATAAGAGATGTCAGTTTTCTTCTCTTTGTGCTTGTGTGCTTGTTCGCCATCTTAATTGCCGGCGAGATCAATGTTATTGGGGCAATTAGCTTCTGTTTGATGTATGTTGTTTATGTGGTTATTGTCTACATCTCGTCGACCCGGTGGAAGGGTGACTCTAGCGACGGTCAATCGAGTAATGGCGACGATCCGTCCGTGCCCCTTATCATTGGAATGGAGAAAGGAGTAATTGGTAATGATGAAAATGGATCTCAAGAATGTAGGTTCAACTTTGAGGAGAAATTCTGCTTTAAGAAATCTCCAGTTTGTAGATTTTCACTTTGTGTCTTGGAGTTGCCACTTTACTTGCCAAGGAGATTGACAATTCCGGTTGTTTGTGAAGAGAGATGGTCCAAACCATATGCAATTCTGTCAGCCCTGTTATCACCATTGCTATTGTCTTCTCTCTGGACCCCGGGAAGCCTAACGGTCTATGGAACCGGATTATTAATCGGAATCATCTTAGCCGTAGCCGCATTCTTCACCACCGAGCCATCTAGTCCGCCGAAGAAGTACATGTTCCCTTGGCTTGCAGGGGGGTTTGTGATGAGTGTTACATGGAGTTACATTTCAGCTCAAGAACTGGTTGGATTGTTGGTCTCACTTGGTTACATATACGGAATTAGTCCTTCAATTTTGGGGCTAACAGTTCTTGCTTGGGGAAATTCAATTGGAGACTTAGTGACAAATTTGACTATGGCGTTACATGGTGGGACAGAAGGTGCTCAAATTGCAATATCAGGTTGTTATGCTGGCCCTATATTCAACACTGTGATTGGATTAGGCTTATCCCTTGCAAGTTCAACTTGGTCACAGTATCCAAATTCTGTTATTATACCAAAAGATCCATATCTTTGGGAAACACTAACACTTTTGGTAATTGGATTGATTTGGGCACTTTTGGTGTTGGTAAGAAGGGATATGAAGCTTGATTCACTCTTAGGGGGAGGGCTTCTTGCCGTTTACTTCATTTCATTGTTTCTGAGGCTGATTCAGACATTAGGGACTTGCCAATTTCAGGATATATTACCAAAATGA 1713 0.4314 MDNTAVSVSKRMGYSTLLLNASFLIVFSVFLVLHVNSPSEQLPLRKYHFTLGDIDENDDSCKSFHSLSDNEAKCLYLKSNDPCVTEGYVDYLYLFYCKFGDLALFGQTLLFLWLLVLFYLLANTASEYFCPSLESLSKLLRLSPTVAGVTLLSLGNGACDVFATLVSFNGSGTGGIGFNTVLGGASFVSCVVVGIVSISVRHRGIRVKKSALIRDVSFLLFVLVCLFAILIAGEINVIGAISFCLMYVVYVVIVYISSTRWKGDSSDGQSSNGDDPSVPLIIGMEKGVIGNDENGSQECRFNFEEKFCFKKSPVCRFSLCVLELPLYLPRRLTIPVVCEERWSKPYAILSALLSPLLLSSLWTPGSLTVYGTGLLIGIILAVAAFFTTEPSSPPKKYMFPWLAGGFVMSVTWSYISAQELVGLLVSLGYIYGISPSILGLTVLAWGNSIGDLVTNLTMALHGGTEGAQIAISGCYAGPIFNTVIGLGLSLASSTWSQYPNSVIIPKDPYLWETLTLLVIGLIWALLVLVRRDMKLDSLLGGGLLAVYFISLFLRLIQTLGTCQFQDILPK* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2138 570 PANTHER CATION CALCIUM EXCHANGER 5 563 - -
Ahy16g2138 570 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 5 563 - -
Ahy16g2138 570 Pfam Sodium/calcium exchanger protein 402 554 IPR004837 GO:0016021|GO:0055085
Ahy16g2138 570 Pfam Sodium/calcium exchanger protein 111 255 IPR004837 GO:0016021|GO:0055085
Ahy16g2138 570 Gene3D - 348 555 IPR044880 -
Ahy16g2138 570 Gene3D - 142 282 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2138 Ahy-Chr16 119638116 119640504 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g2138 9 563 Antiporters AT5G17850 51.309 2.44e-160 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2138 K13754 - gmx:100787016 745.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2138 16 119638116 119640504 Ahy6g1840 6 90558199 90560945 hybridization