Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2028 ATGGACCACCAGTACCGCCACGTCATCAGTGCCGGAGCCAGCGATCCCATGCTCCGGACCTCCACTCTACGCACCACCACCTTCTCCTTCCCCCTAGCTCGCTACACCACCCGCCTCATCGCAGCCGACCGCCGCCGCATGCTCCTCGCCGACTGCGCTGACCGCCGATCCGACGACGGCCTCGACGCTTCCGACGATGACGATGGCGGAGGATGCGCGTACTCCAGGCCCGTCCTCGTGTTGGACTTGGTGTGGAACCTGGCTTTCGTCGTCGTGGCTGCCGGCGTGCTCCTCTCCACGCTCCGGGAGCGGCCAGCGACGCCGCTGAGGCTGTGGCTCTGTGGCTACGCGTTCGAGTGCGTGCTCCATATTTGCTTCGTGTTCTTCGAGTATCGCAGGAGAATCGGGGATCCTTCGCTGTCTCAGAGTCCGTACAGCATCCTGAAGAGGTTAGAGCCGGTGAACACTCTGGCATCATCTGTCTGGTGGGTGTTTGGATTTTATTGGATTGTTGTGGGCGGCCAAGCACTACTGGAAGATTCTCCGCAACTTTACTGGTTAACAGTGGTGTTTCTAGCCTTTGATGTATTTTTTATTATCTTTTGCATTGGGATGGCATGTATAATTTTCTTTGCCCTCTTTTGCCTTATCCCAATAATAGCATTAGCTTATGCTATAAGAATCAGGGAAGGTGCATCAGAAGAGGATATTAGGTCACTTCCTAAGTATAGGTTTGGCCAATCAAATTTGTTAGTGTTGGTTGATGACAAGAAGAAGCAAATTGTAAAAGCAGAATCGGATTCATACAATGAAAATCATATCAGTGAACTTTTTCTCGAACCAGATGATTCTGAATGCTGCATCTGCCTATCCCCCTATGTTGATGGAGCAGAACTGTATCGCCTCCCCTGTACCCATCATTTCCACTGTGGATGCATCAGCCGCTGGCTCCGGACAAAAGCAACTTGCCCGCTCTGCAAATTCAATATCCTTAGAGGCGATACGTTAGTCTAA 1014 0.5197 MDHQYRHVISAGASDPMLRTSTLRTTTFSFPLARYTTRLIAADRRRMLLADCADRRSDDGLDASDDDDGGGCAYSRPVLVLDLVWNLAFVVVAAGVLLSTLRERPATPLRLWLCGYAFECVLHICFVFFEYRRRIGDPSLSQSPYSILKRLEPVNTLASSVWWVFGFYWIVVGGQALLEDSPQLYWLTVVFLAFDVFFIIFCIGMACIIFFALFCLIPIIALAYAIRIREGASEEDIRSLPKYRFGQSNLLVLVDDKKKQIVKAESDSYNENHISELFLEPDDSECCICLSPYVDGAELYRLPCTHHFHCGCISRWLRTKATCPLCKFNILRGDTLV* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2028 337 PANTHER RING-FINGER UBIQUITIN LIGASE 22 337 - -
Ahy16g2028 337 SMART ring_2 286 326 IPR001841 -
Ahy16g2028 337 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 256 333 IPR013083 -
Ahy16g2028 337 PANTHER TARGET OF ERK KINASE MPK-1 22 337 - -
Ahy16g2028 337 ProSiteProfiles Zinc finger RING-type profile. 286 327 IPR001841 -
Ahy16g2028 337 Pfam Ring finger domain 285 327 IPR001841 -
Ahy16g2028 337 SUPERFAMILY RING/U-box 274 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2028 Ahy-Chr16 112324524 112328377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g2028 13 334 C3H Transcription Factor Family AT1G68070 44.186 6.29e-92 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2028 - - ahf:112696795 632.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2028 16 112324524 112328377 Ahy6g1740 6 84477341 84481240 hybridization