Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2003 ATGGCAGAAAGATTATCTCTTGGCAATGTTGAGGACAGAAAGCTCAAAAGCAAGATGGAGGATTCTCCCACCCAAGACCGTCCAGAGTCAGAGAATCCAACATTGTCTTTGATGATGATGGAGGAGTCACCTACCATGAACGGTCTAGATCCAGAGAATCTAACATTGTCTTTGACGACTAAGATGGAGGATTCACCCATCATGGACAGTTTACAGCCAGAGAATCTAACACTGTCTTTGGCGACTAAGATGGAAGATTCACCCACCATGGAGGGTGTAGGGTCAGACAATCTAATGTTGTCTTTGACTCTAGCTACCAGAACCATGGTAGATGAATCTCATTCTAAAGCCACGTCAACTTCTAATAAACCCTCGAAAGATCCAGAGGGTTCAGGATCAAATACTCTCCAAAATCATATAGATACCTCTGATGACAAGGAAGATTCACCTTTCCCTTGTGGATTTTGCAATAGAAGGTTCAGTAGTTCCCAAGCCCTAGGGGGACACCAAAACGCACACAGGAGAGAGCGTTCTCCCTTAAATAAAAGAAAGAAAACAAACGAACCAGAAGAGATGGATGAAGCAGATCTATTTGCCAACCGTGCTCTTGGTAGTTTTCTTAGTTCAAACTATTCTTCATTCTCCACCACCGTACCAAGCCTTCGATTCCAAGGCTTATCACCACCCTCATCAACCCTATCTCCCCACCCATACCATCATGGTGGCAGCACGATGACCAGGAGTCACATGACTAGTCACGTGTCATCCTTACCATCTTGGCCGCGCCCTGGTTCAATAGGTAGTCGGGCTTTTGGAGGCTATGGCCCTTCGTATGGGACGCAACCTTTCCCCAAAGCATCGTCCCTATTGTCGCCGCAACATCGGTTTGGGACGAATAACTCTTGGAGAGAGGAACATACGGGTATTCTGGAGAGACTCAACCACAACAAGCACGTCGGACTTCTCAATGAACTCAGCCGCATTCCTTCAGTTCCTGAGGCTGCCACCCGGATCGGCCGTCATCAACCTCATGTGGAGTTTGGTGACAGCCAAGGTGGCAGCAGCCGCCTTCGTCTTGATGGTGGTAGCAATGCTGGGGGAAATAATAATAATAATAATAATGACCACCACCACGAAGAAGATGGAAATCCCAGTGTGTCACCAAATGATTCAGCATCGGAAGAGCTAGACTTAACGCTGGGTCTTTGA 1209 0.4706 MAERLSLGNVEDRKLKSKMEDSPTQDRPESENPTLSLMMMEESPTMNGLDPENLTLSLTTKMEDSPIMDSLQPENLTLSLATKMEDSPTMEGVGSDNLMLSLTLATRTMVDESHSKATSTSNKPSKDPEGSGSNTLQNHIDTSDDKEDSPFPCGFCNRRFSSSQALGGHQNAHRRERSPLNKRKKTNEPEEMDEADLFANRALGSFLSSNYSSFSTTVPSLRFQGLSPPSSTLSPHPYHHGGSTMTRSHMTSHVSSLPSWPRPGSIGSRAFGGYGPSYGTQPFPKASSLLSPQHRFGTNNSWREEHTGILERLNHNKHVGLLNELSRIPSVPEAATRIGRHQPHVEFGDSQGGSSRLRLDGGSNAGGNNNNNNNDHHHEEDGNPSVSPNDSASEELDLTLGL* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2003 402 MobiDBLite consensus disorder prediction 337 402 - -
Ahy16g2003 402 Gene3D Classic Zinc Finger 131 202 - -
Ahy16g2003 402 PANTHER OS07G0593000 PROTEIN 88 400 - -
Ahy16g2003 402 MobiDBLite consensus disorder prediction 109 148 - -
Ahy16g2003 402 MobiDBLite consensus disorder prediction 163 191 - -
Ahy16g2003 402 MobiDBLite consensus disorder prediction 109 139 - -
Ahy16g2003 402 SUPERFAMILY beta-beta-alpha zinc fingers 148 178 IPR036236 -
Ahy16g2003 402 MobiDBLite consensus disorder prediction 1 36 - -
Ahy16g2003 402 MobiDBLite consensus disorder prediction 170 191 - -
Ahy16g2003 402 ProSiteProfiles Zinc finger C2H2 type domain profile. 151 178 IPR013087 -
Ahy16g2003 402 MobiDBLite consensus disorder prediction 1 27 - -
Ahy16g2003 402 ProSitePatterns Zinc finger C2H2 type domain signature. 153 173 IPR013087 -
Ahy16g2003 402 MobiDBLite consensus disorder prediction 356 372 - -
Ahy16g2003 402 PANTHER ZINC FINGER PROTEIN JAGGED 88 400 IPR045320 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2003 Ahy-Chr16 109972734 109973942 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g2003 54 183 C2H2 Transcription Factor Family AT5G10970 34.074 4.97e-10 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Ahy16g2003 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2003 - - ahf:112757344 761.911