Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1997 ATGGCAGTGTCTCCTCCTCTTCCAAGCCAGTCTTTGGAAGCTGAATTTGAAGCTCAGAACTCTGAATCCCCACTCTTGCAAATTGGAAATGATGGCCTCACTAAACGTGTTATAAGGAAAGGTCTCACTTGGCAAACTCCATTCTTTGGAGACGAAGTTGAAGTTAATTTCAGAGGACAAGTTGAAAATGGAGCATCTCTTGAATCCAGTTATGATAAAGGGTCCTCGTTTCGTTTCAAATTAGGCCAATGTGAAGTTATCAAGGGTTGGGATGAAGGAGTTGGGAGCATGAAGAAAGGGGAGAGAGCAATCTTCAAAATGCCACCTAACTTGGCGTATGGGGAAGTAGGGTCTCCACCACTGGTTCCTCCCAACGCGACTCTCATTTTCGAAATCGAATTGCTATCTTGGAATACCATTAGAGACTTGAATGGTGATGGAGGAATCATCAAAAAGATTCTAAAAGAGGGAGATGGATGGGCTACCCCTAAAGACGCTGATGAAGTTCTAGTGAAATATGAAGCAATGCTAGAGAGTGGCATGCTTGTCTCTAACTCTGACCAAGGTGTGGAATTTAATGTAAGTGAAGGCTATCTATGTCCTGCCATGAGTGTAGCAGTTAAGACCATGAGAAAGGGTGAGGTGGCAGAGCTAGCTTTGAAATTCTCTTATGGAATCATTCAAAATCCAGATAGAATCAAGGAGCCTGATGGTTTTCTCCAACCGGATTTCAAGATAATAACCATCAAACTAGAGTTAGTATCATGGAAAATTGTGACCGATGTCACAGGCGATAAGAAAATATTGAAGAAAATTAAGAAATCTGGTGAGGGGTTCGATCGTCCCAACGAAGGATCTCATGTGAAAGTTATATATTCATGTAAACAAAAAGATGGAACAATTATTCAGAAGAAAGGATCAGAGGAAGAACCTTTTGAGTTCACAATTCAAGAAGGACAGGTGCCTGAGGGTCTAGAAAGAGCAATAATGACAATGAAAAAAGCAGAACAAGCTCTTGTGACTATCAGTGCTGATTATTTTAGTGACAACAATTCACAGGGAGAAGGAGAAGACACACCTAACAATAACAATAATAGTAATAATAAAGTCCTTTACTATGAAGTTGAATTGGTTGATTTCGTTAAGGAGAAACCATTTTGGAAGATGGACAACCAAGAGAAATTAGAAGCTTGTGAGAAGAAGAAGCATGATGGGAATTTGATGTTTAAGGCTGAAAATTTCAGGCGTGCATCCATGGAATATGAAAAGGCTGTAAAATGCATAGAGTTTGATCATTCATTCAGTGAAGATGAGAAGAGTCATGCAGATACGTTACGGTTATCATGTAACTTGAATAATGCTGCTTGTAAACTCAAATTGGGGGACTACACTGAAGCTTCCAGATTATGCACAAAGGTACTAGAGAAAGACCCTTTAAATGTGAAGGCTCTATACAGAAGATGCCAAGCATACCTGAAAACATCAGATTTGGAGAAAGCTGAGGTTGATATTAAAAGAGCACTCATTATTGATCCAAATAACAGAGACATTAAAGTTGAGTACAAAGAGTTGAAGCTCAAGCAGAAGGAATACAATAAATATGAATCCAACATCTTCGGCACAATGTTTTCAAGGATGAGCTAG 1644 0.3942 MAVSPPLPSQSLEAEFEAQNSESPLLQIGNDGLTKRVIRKGLTWQTPFFGDEVEVNFRGQVENGASLESSYDKGSSFRFKLGQCEVIKGWDEGVGSMKKGERAIFKMPPNLAYGEVGSPPLVPPNATLIFEIELLSWNTIRDLNGDGGIIKKILKEGDGWATPKDADEVLVKYEAMLESGMLVSNSDQGVEFNVSEGYLCPAMSVAVKTMRKGEVAELALKFSYGIIQNPDRIKEPDGFLQPDFKIITIKLELVSWKIVTDVTGDKKILKKIKKSGEGFDRPNEGSHVKVIYSCKQKDGTIIQKKGSEEEPFEFTIQEGQVPEGLERAIMTMKKAEQALVTISADYFSDNNSQGEGEDTPNNNNNSNNKVLYYEVELVDFVKEKPFWKMDNQEKLEACEKKKHDGNLMFKAENFRRASMEYEKAVKCIEFDHSFSEDEKSHADTLRLSCNLNNAACKLKLGDYTEASRLCTKVLEKDPLNVKALYRRCQAYLKTSDLEKAEVDIKRALIIDPNNRDIKVEYKELKLKQKEYNKYESNIFGTMFSRMS* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1997 547 Gene3D - 258 383 IPR046357 GO:0003755
Ahy16g1997 547 SUPERFAMILY FKBP-like 25 138 - -
Ahy16g1997 547 Gene3D - 8 140 IPR046357 GO:0003755
Ahy16g1997 547 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 9 260 - -
Ahy16g1997 547 SUPERFAMILY FKBP-like 143 239 - -
Ahy16g1997 547 ProSiteProfiles TPR repeat profile. 481 514 IPR019734 GO:0005515
Ahy16g1997 547 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 166 257 IPR001179 GO:0003755
Ahy16g1997 547 Pfam Tetratricopeptide repeat 458 513 - -
Ahy16g1997 547 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 259 378 - -
Ahy16g1997 547 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 373 547 - -
Ahy16g1997 547 Gene3D Tetratricopeptide repeat domain 384 540 IPR011990 GO:0005515
Ahy16g1997 547 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 162 228 IPR001179 GO:0003755
Ahy16g1997 547 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 281 378 IPR001179 GO:0003755
Ahy16g1997 547 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 50 135 IPR001179 GO:0003755
Ahy16g1997 547 SMART tpr_5 481 514 IPR019734 GO:0005515
Ahy16g1997 547 SMART tpr_5 447 480 IPR019734 GO:0005515
Ahy16g1997 547 Gene3D - 141 257 IPR046357 GO:0003755
Ahy16g1997 547 PANTHER PEPTIDYLPROLYL ISOMERASE 9 260 - -
Ahy16g1997 547 PANTHER PEPTIDYLPROLYL ISOMERASE 259 378 - -
Ahy16g1997 547 PANTHER PEPTIDYLPROLYL ISOMERASE 373 547 - -
Ahy16g1997 547 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 285 381 IPR001179 GO:0003755
Ahy16g1997 547 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 50 138 IPR001179 GO:0003755
Ahy16g1997 547 SUPERFAMILY FKBP-like 256 401 - -
Ahy16g1997 547 SUPERFAMILY TPR-like 392 543 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1997 Ahy-Chr16 108937995 108947518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1997 26 546 Calmodulin-binding Proteins AT5G48570 53.143 0.0 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1997 - - adu:107494131 1057.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1997 16 108937995 108947518 Ahy16g1997 16 108937995 108947518 ECH
Ahy16g1997 16 108937995 108947518 Ahy6g1717 6 81887024 81905370 hybridization