Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1958 ATGTTGTTGCTTGGCATGGTTGGTTTGCAATGGATGCTTTCTTTGTACAATAACAAGTTGAATAGAATTTTGGCGGATGAGATGGGTCTTGGAAAAACTGTGCAGGTTATGGCATTGATTGCATACTTCATGGAATTTAAAGCAAACTATGGCCCGCTTCTTATAATAGTACCGAATGCTGTTTTAGTTAACTGGAAGAGCAAGTTTTATAATTGGCTACCATCTGTATCGTGCATTTTTTATGTTGGAAGCAAGGATCAACGGTCAAAATTGTTTTCACAACTGATGAGCAAGAAAGTACCAAGAACAAAAGAAGAACTCCTTGAACTCAATGGCATGAGCAAGGCCAAGGTAAGCAATTACGGTGATCAGATACTGGAAACCATTGAAAATACTATTAATGAGTATTACAAGTTGGATAAAAGCATCAATGGCAGTGCTGATTCTGCAAAAAGGAGACGAGATGCAAATGGAGGTCTAGATAGAACTATGAAAATGTTGGAATGA 507 0.3767 MLLLGMVGLQWMLSLYNNKLNRILADEMGLGKTVQVMALIAYFMEFKANYGPLLIIVPNAVLVNWKSKFYNWLPSVSCIFYVGSKDQRSKLFSQLMSKKVPRTKEELLELNGMSKAKVSNYGDQILETIENTINEYYKLDKSINGSADSAKRRRDANGGLDRTMKMLE* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1958 168 SUPERFAMILY HRDC-like 96 133 IPR010997 GO:0000166|GO:0044237
Ahy16g1958 168 Pfam SNF2-related domain 19 98 IPR000330 GO:0005524|GO:0140658
Ahy16g1958 168 PANTHER ATP-DEPENDENT HELICASE BRM 6 96 IPR031056 GO:0006338|GO:0006355|GO:0008094|GO:0040029
Ahy16g1958 168 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 13 167 IPR014001 -
Ahy16g1958 168 PANTHER SNF2/RAD54 HELICASE FAMILY 6 96 - -
Ahy16g1958 168 MobiDBLite consensus disorder prediction 148 168 - -
Ahy16g1958 168 Pfam HRDC domain 96 129 IPR002121 GO:0003676
Ahy16g1958 168 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 99 IPR027417 -
Ahy16g1958 168 Gene3D - 6 145 IPR038718 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1958 Ahy-Chr16 104780712 104784721 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Ahy16g1958 SNF2_N 2.30E-16 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1958 - - aip:107604671 297.36