Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1909 ATGGAAAACATGCCACCAGGTTATCGTTTCTACCCTACGGAAGAGGAGCTGATTTCATTCTATCTACGGAACAAGCTTGAAGGAGTGAGGGAGGACATGAATCGGGTTATTCCAGTTCTTGATATATATGAATATAGTCCAAGCCAACTCCCACAAATATCGGGAGAGGCAAGTGTTAGAGACAGCGAGCAGTGGTTCTTTTTCATTCCGCGGCAAGAAAGCGAAGCGCGTGGAGGGAGGCCGAAGAGGCTCACAACAACTGGGTACTGGAAAGCCACTGGCTCCCCTAACCATGTTTTCTCTTCCGATAATCGCGTCATCGGAATGAAGAGAACCATGGTTTTCTACTGCGGTAGAGCTCCTAACGGAACTAAAACCGATTGGAAGATGAATGAGTATAAAGCCATTGACACTCATCACGCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCCAACAACAGGGCGGTTCCTATGTTAAGGCAAGAATTCAGTTTATGCCGAGTGTACAAGAAAGCAAAATGTTTGAGGGCATTTGATAGAAGACCACCTCCAAGGAGGGACACATATCCTCCTAGCCAGAACAACGGTTCATCATCTTTTGATCATCATCATCAACATAATCAAACGGTGGAGAAATCTTCAGGTGCAGGTAGCTCACCGGAGAGTTCGTGCTCCGAAGACCACGGACAGTGTTCTCATCGGACGGAGGACGTGGAAAACGCTAACGAGCCATTTCTCGATTGGGAGCAAATCGATTGGTTCTTAGGATCTTCTTCACCGCCGGAACCATGA 792 0.4684 MENMPPGYRFYPTEEELISFYLRNKLEGVREDMNRVIPVLDIYEYSPSQLPQISGEASVRDSEQWFFFIPRQESEARGGRPKRLTTTGYWKATGSPNHVFSSDNRVIGMKRTMVFYCGRAPNGTKTDWKMNEYKAIDTHHASSSSSSSSSSNNRAVPMLRQEFSLCRVYKKAKCLRAFDRRPPPRRDTYPPSQNNGSSSFDHHHQHNQTVEKSSGAGSSPESSCSEDHGQCSHRTEDVENANEPFLDWEQIDWFLGSSSPPEP* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1909 263 Gene3D NAC domain 13 175 IPR036093 GO:0003677|GO:0006355
Ahy16g1909 263 Pfam No apical meristem (NAM) protein 5 134 IPR003441 GO:0003677|GO:0006355
Ahy16g1909 263 SUPERFAMILY NAC domain 2 171 IPR036093 GO:0003677|GO:0006355
Ahy16g1909 263 MobiDBLite consensus disorder prediction 177 242 - -
Ahy16g1909 263 MobiDBLite consensus disorder prediction 210 226 - -
Ahy16g1909 263 ProSiteProfiles NAC domain profile. 4 171 IPR003441 GO:0003677|GO:0006355
Ahy16g1909 263 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 4 253 - -
Ahy16g1909 263 MobiDBLite consensus disorder prediction 227 241 - -
Ahy16g1909 263 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1909 Ahy-Chr16 100258811 100260716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1909 7 253 NAC Transcription Factor Family AT5G22380 52.000 1.09e-81 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy16g1909 NAM 1.10E-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1909 - - gmx:100777948 348.591
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1909 16 100258811 100260716 Ahy6g1655 6 75207198 75208932 hybridization