Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1850 ATGATGGACTTATCACTACACAAGCAACTCTTCCCCCTCCTCTCTCTTCTCTTAATTCTATTTCTCTCAGGACAAAGGATGCAAGCAGATGCTAATAGCCTTCAAAATCCCCAACTCAGTGAACCAACCAAGAAACTCTTCGTTTTTGGAGACTCATATGCTGACACCGGCAACATCAGAAAAAGTCTCTCCAATTCATGGAAAGACCCCTACGGCATCACCTTTCCCGGCAAGCCAGCCGGTCGATTCTCCGATGGAAGGGTCCTCACCGACTACATTGCTAAGTACCTGGGAGTGAAAACACCTGTGCCATACAGATTTCGGAAGCAAATGGCGCAGCAGCTGAAGTACGGCATGAACTTTGCAGTGGGTGGAACTGGCGTATTTGACACGTCTACTCCAGGGCCCAACATGACCACGCAGATCCAATTGTTGGAGCAACTCATCCACGACGGACTCTACATAGCTTCTGATCTCACCAACTCCATCGCTCTTGTCTCTGTTGCTGGTAACGACTATAGTCACTACCTCGCCACTCATGCCTCTCCTCAGGGTCTACCATATTTCGTGGCGTCAGTGGTGAATCAAACAACAAGGAATCTGATGCGGATCAAAGCATTGGGGATAAAGAAGATCATAGTTGGCAGCCTCCAACCCCTTGGATGCCTACCTCAGGTCACAGCCTTCTCGTCCTTCCAACAATGCAACGCCTCTTCCAACACCTTGGTGGCTTTCCACAACAACCTCTTGAACCAAGCAGTTACCAATTTGAACCAATCGTGGTCGTCGTCCTTCGCGGTTCTCAATCTCTACGACAGCTTCATGTCCGTCCTAAACCACCCTACAACGCACAACATCCAGAACCAGTTGCGGCCGTGCTGCGTTGGGGTAAACAGCAAGTATTCATGTGGGAGTGTGGATGAGAATAACGTGAAGATGTATAGGGTTTGCAACGATCCCAAATCCGCCTTCTTTTGGGATCTGGTGCACCCCACGCAGGCCGGGTGGCATGCCGTGTATAACAAGTTAAGAACCATGAATGCTCTTCAAGGAATTCAGTTCTAG 1065 0.493 MMDLSLHKQLFPLLSLLLILFLSGQRMQADANSLQNPQLSEPTKKLFVFGDSYADTGNIRKSLSNSWKDPYGITFPGKPAGRFSDGRVLTDYIAKYLGVKTPVPYRFRKQMAQQLKYGMNFAVGGTGVFDTSTPGPNMTTQIQLLEQLIHDGLYIASDLTNSIALVSVAGNDYSHYLATHASPQGLPYFVASVVNQTTRNLMRIKALGIKKIIVGSLQPLGCLPQVTAFSSFQQCNASSNTLVAFHNNLLNQAVTNLNQSWSSSFAVLNLYDSFMSVLNHPTTHNIQNQLRPCCVGVNSKYSCGSVDENNVKMYRVCNDPKSAFFWDLVHPTQAGWHAVYNKLRTMNALQGIQF* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1850 354 PANTHER OSJNBB0059K02.9 PROTEIN 6 353 - -
Ahy16g1850 354 Pfam GDSL-like Lipase/Acylhydrolase 46 342 IPR001087 GO:0016788
Ahy16g1850 354 Gene3D SGNH hydrolase 33 350 IPR036514 -
Ahy16g1850 354 SUPERFAMILY SGNH hydrolase 42 343 - -
Ahy16g1850 354 CDD SGNH_plant_lipase_like 46 343 IPR035669 -
Ahy16g1850 354 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 6 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1850 Ahy-Chr16 95431142 95444238 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1850 46 339 Pollen Coat Proteome AT1G75930 26.183 5.98e-27 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1850 - - gmx:100788092 506.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1850 16 95431142 95444238 Ahy6g1610 6 68853419 68860264 hybridization
Ahy16g1850 16 95431142 95444238 Ahy12g2958 12 119200746 119205562 PCT
Ahy16g1850 16 95431142 95444238 Ahy2g2543 2 101602821 101607637 PCT