Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1842 ATGGAGGCAAGCTCAGTCGTAGAAGACGATGAACGTGTTATCCTTGTTTGCACAGACCCCGATTCTCTCGAACCTCAAACTCCAGACCAAGAACACCTTCTCCTCACCGCCACAGATATCCTCACCTGGGACTTGCCTAACATCCTCACTTTCAACACCCTCAAAGTTCAAGCACATCGCTCCAGGCTCATTGAGCAATCCTCGTATTTCCGTGGTCTACTCGGCCGGAGTTTCAGTGAATCGTGCTTGAGCTTAATCACTGTTAAATGGGATATCGGTGTATTTATCCAGATTCTGAAGCATATCTATGATTGTTCATTGGATGTTACTTCTGAGAATTTCCTCCCCCTTTATGAGGGTGCGTTCTATTTTGGAGTGGAAACACTGATATTGAAGTGTGAGTCTTGGTTTTCTGAGGTATCCTCACCTGAAGGCTTTCAGTCAGCGCAATTGCCAATGGAGGACATGATCCAAATTTGGAAGTTTGGCTTAGAGCATGCTAGTGACTTTATTGTGAACTTGTGTGTGGGCTGCCTGGCAAGAAATTTTATGTGGGCAAAGCACAACATGTTTTTCAAGAGAATCCCGCATGAACTGCTGTTGTCTTCAGTTAAGCATCCACACTTGACTGTTGACAGTGAAACACATCTTTCTGATGCACTTCTTCTCTGGCTTGAAAGTAACATGGAAAATTTGGAGTGCCAGAGCAAGGATGAAGACAACTGCTATGAAATTTTAAAACAGATTCGTCTGGACCTTTTGGCTTTGTGGTTTGCTGCAGGAAAAAGAAACTCTTCTCATTTTAGGCAGCTAGCTGAGGAAAGCATTGCTTCAATTTTCAGACTTTTGACTATTCCACTTATGGGTTCACAAGATATTTTTGGTTATAGTGACTTGCAACATCTCAAAATTCGGCTCACAGAGTATTCAAAGAAAGTAGACCTTTCCAATTGTCCGCAAATAACACCTGCAATCCTGCTTCTATCACTTCTCCCTTCATCGTATATAATGGATCCTGCTAAAAAGAAGATTATAGAAAAGTTCTTTATCAACTCTGGAGGTCCTTCAAAAGATAGACATGTATTTCCTCAAAGACTCTTGCAAACCACTACCTTTGAGGTAGTTCAGGAGGTGGATATCTCAAAGTGCTGGAGATTGCTTATTGAACATGCTGTTGATTACTTCTGCAAGTCATTTCCTTGTTTAAGAATATTGAAAGCAGCTTATCTATTGAACATCGGGACAATCAGTTTCTTACAGTTGTTGGAGAAGTTCCCTTTGGTCTGTGAAATTGATTTGACTGTTGATAGTACCCCAGTAATACCAGCATTATTTACCATTTTATCCTCCAATCCTGCTTTAATACCACCTGTACCACAGAAGACCTCTATTATTAACCACAAGGCAGTGGAAATCATGCCATTTTATAAATTTGGACCTCCACTTTCTAATGTTACAAGACTCACATTGGAAGGAAGAACTGATGTCTGTGATTCGGTTCTCCTCTATATCTCCAGATTCTGTGTTTCATTGTGTCACCTGAATATTAAAGGATGTATTTCTGTCACCGATGTTGGCATATCAGATCTCATATGCAGGTGTAGAAAACTTAATTCAATTGTGGTTTGTGATACATCATTTGGGATAAATTCAGTTCAAGCTCTTTCCTCGGCTATTTCTGATGGTGGCAATACTTCCTCTGTGCATTCTAGAGAGAAACATTTGAATTCTGTAGCATCTAATCTTCAAGAACTGCATATGGGTGGGTGCAAGGGTGTTTCTGATTCATCTTTACTTGAGCTTATGTCTCAGACACAGCTTTTGAAGAGTTTATGCCTGAGAGGGACTGATCTGGTTGACCAGGCGCTTTATAATTTCCTAGGTTCTTCCTTGGAGATGCTTGATGTTTCAAATACCAAGATTTCTGGAGCTGCGTTAGCTCATGTCGTTCATAGAAATCTGAGTTTGAAATGTCTGAAAGCAAAAGATTGTAGAAATCTGTTTCCAGATAACAGTTGTATTGAAAAAAGAGAATGCTGCTTTTTCTCTTTGCATGAAGAACTACATGCTGAGTTCAGAAAAACATATAGCTTGGAAGAAATTGAATTTGGATGGGGTTTTTCTACCTCATCTTTGAGTGATATGGAACCTATAATGATGTCATTAAAGACCATCCATATAGGTTTAGGTGGTATGTTAGGTGAAGATGCACTGAGAAAATTACCTTCAACCTGTCCTTTGCTGGAAAAAATAATTCTTCATTTTCAGGTAATATCAGATGCTACTTTGACAAATATGGTTTCATCCTTGATAAACTTGCAAGAATTATCTCTGTGCTATTGTTTTGGTGATATATCCATGTCAAGCTTCAAATTCTCCATGCAAAGTCTAACGAAGTTGAGGCTTGAAAGAGTAACCCCTTGGATGACAAATGCTGATCTGCTTATTTTAAGTCAGAGCTGCAAAAATTTGGTTGAGCTTTCATTGCTAGGATGTCCTAGTCTTAACTCAGATTCTCAAGAGATAATTTCACATGGCTGGCCAGGCTTGATCTCTATCCATTTAGAGGAATGTGGAGAAGTAACATCAAATGGGGTCTCTGCTTTTTTTAACTGCAAAGCTCTTGAAGATCTCCTGTTGCGTCATAATGGTCCTGGGCTACAGAGAAACTTCATTTTGAAAGCTGCTTCGGAGATGCCATTGCTTCGAAAATTGTCACTGGATGTATGTGATGCGAGTGAAGGTGATTTTGACATTCCTGATTATGCAAACAGATACTCGTTGAGTACGGTAAAGATAGCAAGGTGCAAATCTCAAAGATGCGCATTTAATCTCCCAGCCCCTCCAAGAAGATCTGTTCATGTGGAAAGTCTGGTGCTTGTGTGGAACAGCAGAGATCTCACCAGAACCGTGGTGAAGGAACGGCTTTAG 2931 0.4016 MEASSVVEDDERVILVCTDPDSLEPQTPDQEHLLLTATDILTWDLPNILTFNTLKVQAHRSRLIEQSSYFRGLLGRSFSESCLSLITVKWDIGVFIQILKHIYDCSLDVTSENFLPLYEGAFYFGVETLILKCESWFSEVSSPEGFQSAQLPMEDMIQIWKFGLEHASDFIVNLCVGCLARNFMWAKHNMFFKRIPHELLLSSVKHPHLTVDSETHLSDALLLWLESNMENLECQSKDEDNCYEILKQIRLDLLALWFAAGKRNSSHFRQLAEESIASIFRLLTIPLMGSQDIFGYSDLQHLKIRLTEYSKKVDLSNCPQITPAILLLSLLPSSYIMDPAKKKIIEKFFINSGGPSKDRHVFPQRLLQTTTFEVVQEVDISKCWRLLIEHAVDYFCKSFPCLRILKAAYLLNIGTISFLQLLEKFPLVCEIDLTVDSTPVIPALFTILSSNPALIPPVPQKTSIINHKAVEIMPFYKFGPPLSNVTRLTLEGRTDVCDSVLLYISRFCVSLCHLNIKGCISVTDVGISDLICRCRKLNSIVVCDTSFGINSVQALSSAISDGGNTSSVHSREKHLNSVASNLQELHMGGCKGVSDSSLLELMSQTQLLKSLCLRGTDLVDQALYNFLGSSLEMLDVSNTKISGAALAHVVHRNLSLKCLKAKDCRNLFPDNSCIEKRECCFFSLHEELHAEFRKTYSLEEIEFGWGFSTSSLSDMEPIMMSLKTIHIGLGGMLGEDALRKLPSTCPLLEKIILHFQVISDATLTNMVSSLINLQELSLCYCFGDISMSSFKFSMQSLTKLRLERVTPWMTNADLLILSQSCKNLVELSLLGCPSLNSDSQEIISHGWPGLISIHLEECGEVTSNGVSAFFNCKALEDLLLRHNGPGLQRNFILKAASEMPLLRKLSLDVCDASEGDFDIPDYANRYSLSTVKIARCKSQRCAFNLPAPPRRSVHVESLVLVWNSRDLTRTVVKERL* 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1842 976 Pfam BTB And C-terminal Kelch 157 258 IPR011705 -
Ahy16g1842 976 Pfam BTB/POZ domain 52 135 IPR000210 GO:0005515
Ahy16g1842 976 Gene3D Ribonuclease Inhibitor 376 566 IPR032675 -
Ahy16g1842 976 Gene3D Ribonuclease Inhibitor 567 957 IPR032675 -
Ahy16g1842 976 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN FBL11 60 875 - -
Ahy16g1842 976 SUPERFAMILY POZ domain 49 137 IPR011333 -
Ahy16g1842 976 CDD BTB_POZ_ZBTB_KLHL-like 48 124 - -
Ahy16g1842 976 SUPERFAMILY RNI-like 297 668 - -
Ahy16g1842 976 SUPERFAMILY RNI-like 679 912 - -
Ahy16g1842 976 PANTHER UNCHARACTERIZED 60 875 - -
Ahy16g1842 976 ProSiteProfiles BTB domain profile. 45 111 IPR000210 GO:0005515
Ahy16g1842 976 SMART BTB_4 11 141 IPR000210 GO:0005515
Ahy16g1842 976 SMART LRR_CC_2 770 800 IPR006553 -
Ahy16g1842 976 SMART LRR_CC_2 745 769 IPR006553 -
Ahy16g1842 976 SMART LRR_CC_2 847 872 IPR006553 -
Ahy16g1842 976 SMART LRR_CC_2 307 333 IPR006553 -
Ahy16g1842 976 SMART LRR_CC_2 579 604 IPR006553 -
Ahy16g1842 976 SMART LRR_CC_2 821 846 IPR006553 -
Ahy16g1842 976 SMART LRR_CC_2 628 652 IPR006553 -
Ahy16g1842 976 SMART LRR_CC_2 508 533 IPR006553 -
Ahy16g1842 976 Gene3D - 183 282 - -
Ahy16g1842 976 Gene3D Potassium Channel Kv1.1; Chain A 48 182 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1842 Ahy-Chr16 94689120 94699659 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1842 - - adu:107493902 1792.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1842 16 94689120 94699659 Ahy6g1602 6 67799671 67810037 hybridization