Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1841 ATGAAGACGTTTCCTCCCTCCGACACCTTTTACTGGTACAAGATTGAAGACGTTTCCTCGTACCGAGGTGGCTTGGAGCTGTGGAACCATCATCATTATCATTTCCAACCGGAACACGACCTCATACCTCAAGCAAGGCCTCTCTTCCACCAAGATCTTTATAGCTCCGCGGATGCTCTAGGAGTGGGTCTAACCACCGTGTCTAACGATCAGTCACCCGCCTTCCTGGTGATGGCATCGGCCGTGGGGAGTGGAGTAGCAAGTGGAGCAGGAAGTGGAGCAGGTGCGATTAGCTGCCAGGACTGCGGGAACCAGAGCACTTGGGTTCCCGCTTCCAAGTGCCGCGAGAGGCAACAGCAACTCGCCTCTATCCAACAACAACAGCTTCTTGCTGCTGATGTTCCCAAGCGCCATAGAGATCATGCCTGGTGGCTGGTAGCAGCAGAGGAGGAAGACGAAGGATGA 465 0.5441 MKTFPPSDTFYWYKIEDVSSYRGGLELWNHHHYHFQPEHDLIPQARPLFHQDLYSSADALGVGLTTVSNDQSPAFLVMASAVGSGVASGAGSGAGAISCQDCGNQSTWVPASKCRERQQQLASIQQQQLLAADVPKRHRDHAWWLVAAEEEDEG* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1841 154 Pfam Domain of unknown function (DUF702) 105 139 - -
Ahy16g1841 154 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 4 105 IPR007818 GO:0003700|GO:0006355
Ahy16g1841 154 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 105 136 IPR007818 GO:0003700|GO:0006355
Ahy16g1841 154 PANTHER TRANSCRIPTION FACTOR STY-LRP1 FAMILY-RELATED 4 105 - -
Ahy16g1841 154 PANTHER TRANSCRIPTION FACTOR STY-LRP1 FAMILY-RELATED 105 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1841 Ahy-Chr16 94591575 94592117 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1841 20 141 C2H2 Transcription Factor Family AT5G66350 37.838 1.87e-14 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Ahy16g1841 DUF702 3.50E-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1841 - - aip:107636969 196.823