Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1827 ATGGGTCACAAGTCCATGTTACAGGAGCTTCTGAAAGAAGAGCAAGAGCCTTTCCTGCTAAACAAGTACATTTCCGATAGGAGAACCCACATGAAGACCACCACTACTACTCTCGTCAACAACAAACAACGCAGCACAACTTTCCCACTCAATCTCTGCAAGAACGCATGCTTCTCCACCTCCACTACCACCACCACCACCAAATCCCCTCTCTTGGAATTCCCATCGCCCAATAATAACAAGAAGCCCATATTCCTTCACATTCCTTCTCGAACCGCCGCGCTTCTTCTCGAAGCCGCTCTCAGGATCCACAAACACAAGAAGACCAATCACGGCTTCGGCCTATTGGGCTCCTTCTTCAGGAGACTAAAGCAGAACCGCCGCAAGCACAAGCTCAAGGTGAGCTCCCTCAAAGATCGAGAAAATGTGATTAATAGATCCTACGAGTTGGGGTTTCGATGTTCATACTCTGTTTGGTCAGAGAGCAACGATGATGAGTCTCTCGACATGGAAACCTCAAGTAGCACTAGTACAAACTTTGATGACCACCACCACCACCATATTATTCACAATGGAGGATTCTTTGAAAGCCCATTCCGTTTTGTTCTTCAAAAGAGCCCCTCCTCCTCCTCCGGCCTCAACACGCCGGAGCTACCTTCACCTCCGCCCTCATCACCACAGACTCCCCACACTACGCAGGACAAAGAAAGTAACGGCGGTGAGAGTGTGCATAAATTCCAATCGGGGGAACTAGAAGAAGAAGATAAGGAACAGTGTAGTCCCGTGTCTGTTCTAGACCCACCCTTCGAGGACGATGACGAAGCGCATGGAAACGACGAGGAGGACGAAAATGAGGAGCATGGTTTCGATTTGGAGTGCAGCTATGCCATAATGCAGAGAACTAAGCAGCAGCTATTGTACAAGCTTCGTAGATTCGAGAAACTCGCGGGGCTAGATCCGGTAGAACTCGAGAAAATAATGCTGGATCAAGAAGAGGAGGAGGATGAAACGGTCATGGAAGATGATGGATATGTATACGAGGCCAGTGAAGCATTATCGTGTAAAGAAAATGGCTTGATAGAACAAGTATTTGAAGCTCTCTTTGAGTCATCAAGACTTCAATTCCCAGAAGGCCTTAAGAGACTTGTATCTGATGTCATTGCAGAGGAAGAGAGGGAAATTGAGTGCTTAGAAGATTATAATCATAGGGACATGGTGGTGAGAAAGGTGTGCAAGAGAATGGAGCTTTGGAAACAAGTGGAGTCAAACACAATTGACATGATGATAGAAGAAGATTTTACTAGAGAAGAGGAAAATGGTTGGAAGAAGAAAAATGTGGATCAGATAAGGGACATGGCTGGGGAGCTTGAACTTGCTATCTTTGGGTTTCTAGTTGAAGAATTCTCAGAGGAGCTAGAATGTTAA 1425 0.4618 MGHKSMLQELLKEEQEPFLLNKYISDRRTHMKTTTTTLVNNKQRSTTFPLNLCKNACFSTSTTTTTTKSPLLEFPSPNNNKKPIFLHIPSRTAALLLEAALRIHKHKKTNHGFGLLGSFFRRLKQNRRKHKLKVSSLKDRENVINRSYELGFRCSYSVWSESNDDESLDMETSSSTSTNFDDHHHHHIIHNGGFFESPFRFVLQKSPSSSSGLNTPELPSPPPSSPQTPHTTQDKESNGGESVHKFQSGELEEEDKEQCSPVSVLDPPFEDDDEAHGNDEEDENEEHGFDLECSYAIMQRTKQQLLYKLRRFEKLAGLDPVELEKIMLDQEEEEDETVMEDDGYVYEASEALSCKENGLIEQVFEALFESSRLQFPEGLKRLVSDVIAEEEREIECLEDYNHRDMVVRKVCKRMELWKQVESNTIDMMIEEDFTREEENGWKKKNVDQIRDMAGELELAIFGFLVEEFSEELEC* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1827 474 MobiDBLite consensus disorder prediction 205 287 - -
Ahy16g1827 474 MobiDBLite consensus disorder prediction 237 260 - -
Ahy16g1827 474 MobiDBLite consensus disorder prediction 272 287 - -
Ahy16g1827 474 PANTHER OS04G0572500 PROTEIN 2 474 - -
Ahy16g1827 474 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1B-LIKE PROTEIN 2 474 - -
Ahy16g1827 474 Coils Coil 120 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1827 Ahy-Chr16 91092453 91095934 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1827 4 472 TRM (TON1 Recruiting Motif) Superfamily AT2G36420 33.267 4.25e-39 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1827 - - gmx:100790018 405.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1827 16 91092453 91095934 Ahy16g1827 16 91092453 91095934 ECH
Ahy16g1827 16 91092453 91095934 Ahy6g1585 6 64058438 64061858 hybridization
Ahy16g1827 16 91092453 91095934 Ahy12g2969 12 119295966 119300161 PCT
Ahy16g1827 16 91092453 91095934 Ahy2g2554 2 101698041 101702236 PCT
Ahy12g2969 12 119295966 119300161 Ahy16g1827 16 91092453 91095934 PCT
Ahy2g2554 2 101698041 101702236 Ahy16g1827 16 91092453 91095934 PCT