Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1795 ATGAACATGGAGAGCACGCGTAGATCGTTCGATAGATCGAGAGAGCCGGGCGCCAAGAAGCCCCGATTGATCGACGAGCTCGACAGCAGTTCCAACCCCATTTCCCGACCGTTTTCTCAGCCGCGGCAACCGCCGTCCTCTGCGGTTACACCGTTGACTTCCGCCACCGCGAGGTTCCGAACTAACAGCGACAGGGACTCCGAAAGTAGCGACAGGTACCACCCGCAACCGCCACCGCACCAGGAGCTTGTATCTCAGTACAAGGCCGCGCTAGCTGAGCTCACTTTCAACTCGAAGCCAATAATTACGAACTTGACCATCATTGCAGGAGAGAACCTTTCTGCTGCGAAGGCCATTGCTGGCATCGTTTGTACCAACATTGTAGAGGTTCCAAATGAGCAAAAGCTTCCATCTCTTTATCTCTTGGACAGTATTGTTAAGAATATTGGGCGGGATTATATAAAATACTTTGCTGCCAGACTACCTGAGGTATTCATCAAGGCATACAAACAGGTTGATCCACCTGTCCATTCAAGTATGAGGCATCTTTTTGGAACTTGGAAGGGATACATTCCTCCGCAGACCCTTCAGATGATTGAAAAGGAACTTGGCTTCATGCCTGCAGTCAATGGTTCGGCTTCTTCATCTGCTACACTCGGAAGTGAATCACAGTCACAACGCCCAGCTCATAGCATCCATGTGAATCCCAAGTATTTAGAACGGCAGCGTCTTCAGCAATCCAGCAGGATTAAAGGAGTAGCTAATGATACGACTAGAGCTATTTTGAACTCAAATGAGGATTCAGAGAGGCCAAGTAGAGTTTTGGGTGCTTCACGACCGTGGCTCGATCCTAGGATTAACATGCATCGTATTCAAAGAGATGCATATAACAATTCTGTTCCTGAGAAGAGTTTAGCTGAATCCTATGGGGGCATGAAAAATAGTTCTGGTATTTCAAGTATTGGAAGAACTGGCAGTAGGGTTGCTGAGTTGGGACATGATAAAACTTGGTATAAAGCAGGACTCAGCGTGGCAGAGAACACATCTAATCAAAGTAATGGTTTCAGTTTGAAGCTTGGTTTTTCGAATTGTGAAGCACCAAAGTCGATGAACTTGGGTGCACATCATCAGCCAACACAAAACTTAACTAGCATACAGAGCAGTGTAGTGCCAGGTAGCTGGAAAAATTCTGAGGAAGAGGAATTCATGTGGGATGAAATGAACTCTGGAATGATTGGTGATGGTGCCGCCAGCGTTGCCAACAACTTGAATACAGAACGATGGATGGGTGGTGATGATGAGAATTTGGATGGAGATCAATCCCAAATCTTGCACCATGATAGAGAAATATCTACTGCTAGGAAACAATCATTTGCATCTGGGGGGCATTCATCATTGCCATGGCAATTGCAGGAGCAGAGATCGAATGAAAAGTTGAATCTGAAGCCAGGTCACTCGGAAGAATTGTTGTCAGCTTTAGGTTGCTTACCAGCTAATACAAGTTCTTTGGTTGTCAGGATGGCAAATCGGTCTTCCATGCCAAATGCAACCAAAGGTATGTCTGAAACTATGGGACAAAAGCAATTTGATTCCATGGGAACAAAACCCACTTCTGCGCAGTCACCTTTGCAGCAGCAGTCTGCATCATTGCCTGTAACAAAGCTCCACCCTCATCCAACACAAAATTTGTTGGAGCAAGACTATGGGAAGGATTCTAAAACATCACAGTTTCTGGGAGATCTGCAGAGACAATACATTAGAGATCAACCAGCTGCCCTTCCTCCCAATGCTCAAGTTGGTTGTTTGCATAGATCTAGAGAAAAGGATTTGCATGGTCCTTTATCTTCAGAGACTTCTTTTCTGCCAAGGCATCAGCAGCAGCCACTGGTCTCTTCCCAGACTGAAGTTATTGCAAAAACTAAGAAGCCTCTCCACTCTAAAGTCAAGGCCAGTGAAAGTTCAGAACAATCAAAAAGTAGTTTGTCAGCTGCAACTGTGCAGACTAGATTCCTCAACAAATCAATTACAAATAGTTTTCCTGGTACAAGTAGTAGTCTAGTTACAAAGAATCTTCCATCTGACTTAGGGGTTTGCCCAGCTCTATCAGGTAGACCTTCGCCTGCCACATTAATTTCTTCGGTATCTGCAGTTGCATCACCGTCAACATTAGTTCCTCCAGATGACGATTCTTCTATTCTGGATAACATATCACAAGCAAATACTGGACAGAAACCAAAGGTCTCTACAAAATTACCAACTTCCTCTAACATGAGCAGTGTGTCAGCTCCAACCTCAACTGCTACAAAAAACAATTCCTTGAATCCCATTGCAAACCTTTTAAGCTCACTGGTTGCAAAAGGTTTGATATCTACAGATTCGGAGTCATCGATTAAGGTACCAACAGAGGCATTGGTTCAATTGGAAACGCGTACTGAAAGCATTACTGCCAGTAGCTCATTGCCAGTTCCTTCAGTTACTGGTTCCACAGTTCTCCCAGTAACATCCTCTAAAGTTGTGGAAGATGATGCAAAAGCCTCCCTGATCGTAAGTCAATCAACCAACACCAAAATAAGGAATATCATCGGCTTTGATTTTAAGCCTGATGTAATCCGAGAGATGCATCCCACTGTAATCAAGGGATTATTGGATGATAGTCAACATCATTGCAGATTTTGTGGTATTAAGCTTAAACAGGAAGAACAGTTCAACAAACACTTGGAGTGGCATTTTGCACGAGAAAGAGAGCAACATGGTCTAATTACAGCATCCAGAAAATGGTATGAGAATTGTTTTTCGTCTGAGCCTAGTGATTCTGTAGACGATTATTGTGAGGAAACAGACAGGAGTCCATTTGATGCTATCGTTCCAGCTGATGACAGCCAGTGCTTGTGTGTATTGTGTGGTGATCTGTTTGAAGATGTGTACTGTCAAGAGAGGGATGAATGGATGTTCGAAGGTGCTGTTTACATAAACAACTTAGATAGAAACGGTGAGATGGAAAATAGAAATGTGGGGCCGATTGTTCATGCTAAATGTTTATCTGAGAACTCAGTAGCTGGCAGCACCAAGATGGAACAGGACTGA 3084 0.4413 MNMESTRRSFDRSREPGAKKPRLIDELDSSSNPISRPFSQPRQPPSSAVTPLTSATARFRTNSDRDSESSDRYHPQPPPHQELVSQYKAALAELTFNSKPIITNLTIIAGENLSAAKAIAGIVCTNIVEVPNEQKLPSLYLLDSIVKNIGRDYIKYFAARLPEVFIKAYKQVDPPVHSSMRHLFGTWKGYIPPQTLQMIEKELGFMPAVNGSASSSATLGSESQSQRPAHSIHVNPKYLERQRLQQSSRIKGVANDTTRAILNSNEDSERPSRVLGASRPWLDPRINMHRIQRDAYNNSVPEKSLAESYGGMKNSSGISSIGRTGSRVAELGHDKTWYKAGLSVAENTSNQSNGFSLKLGFSNCEAPKSMNLGAHHQPTQNLTSIQSSVVPGSWKNSEEEEFMWDEMNSGMIGDGAASVANNLNTERWMGGDDENLDGDQSQILHHDREISTARKQSFASGGHSSLPWQLQEQRSNEKLNLKPGHSEELLSALGCLPANTSSLVVRMANRSSMPNATKGMSETMGQKQFDSMGTKPTSAQSPLQQQSASLPVTKLHPHPTQNLLEQDYGKDSKTSQFLGDLQRQYIRDQPAALPPNAQVGCLHRSREKDLHGPLSSETSFLPRHQQQPLVSSQTEVIAKTKKPLHSKVKASESSEQSKSSLSAATVQTRFLNKSITNSFPGTSSSLVTKNLPSDLGVCPALSGRPSPATLISSVSAVASPSTLVPPDDDSSILDNISQANTGQKPKVSTKLPTSSNMSSVSAPTSTATKNNSLNPIANLLSSLVAKGLISTDSESSIKVPTEALVQLETRTESITASSSLPVPSVTGSTVLPVTSSKVVEDDAKASLIVSQSTNTKIRNIIGFDFKPDVIREMHPTVIKGLLDDSQHHCRFCGIKLKQEEQFNKHLEWHFAREREQHGLITASRKWYENCFSSEPSDSVDDYCEETDRSPFDAIVPADDSQCLCVLCGDLFEDVYCQERDEWMFEGAVYINNLDRNGEMENRNVGPIVHAKCLSENSVAGSTKMEQD* 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1795 1027 MobiDBLite consensus disorder prediction 245 276 - -
Ahy16g1795 1027 MobiDBLite consensus disorder prediction 513 548 - -
Ahy16g1795 1027 MobiDBLite consensus disorder prediction 245 271 - -
Ahy16g1795 1027 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 3 1020 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
Ahy16g1795 1027 MobiDBLite consensus disorder prediction 214 233 - -
Ahy16g1795 1027 MobiDBLite consensus disorder prediction 61 75 - -
Ahy16g1795 1027 MobiDBLite consensus disorder prediction 1 80 - -
Ahy16g1795 1027 MobiDBLite consensus disorder prediction 719 768 - -
Ahy16g1795 1027 ProSitePatterns Zinc finger C2H2 type domain signature. 889 909 IPR013087 -
Ahy16g1795 1027 MobiDBLite consensus disorder prediction 28 60 - -
Ahy16g1795 1027 MobiDBLite consensus disorder prediction 1 26 - -
Ahy16g1795 1027 Gene3D - 76 204 IPR008942 -
Ahy16g1795 1027 PANTHER RNA POLYMERASE II-BINDING DOMAIN PROTEIN 3 1020 - -
Ahy16g1795 1027 MobiDBLite consensus disorder prediction 607 663 - -
Ahy16g1795 1027 MobiDBLite consensus disorder prediction 618 639 - -
Ahy16g1795 1027 SMART 558neu5 82 204 IPR006569 -
Ahy16g1795 1027 ProSiteProfiles CID domain profile. 79 207 IPR006569 -
Ahy16g1795 1027 SUPERFAMILY ENTH/VHS domain 79 207 IPR008942 -
Ahy16g1795 1027 CDD CID_Pcf11 84 196 - -
Ahy16g1795 1027 Pfam CID domain 88 197 IPR006569 -
Ahy16g1795 1027 MobiDBLite consensus disorder prediction 214 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1795 Ahy-Chr16 83632670 83639079 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1795 77 407 C2H2 Transcription Factor Family AT4G04885 39.339 1.12e-52 197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1795 16 83632670 83639079 Ahy16g1795 16 83632670 83639079 ECH