Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1728 ATGGAGTGGAATGAAAGCACAAGATCCTTTGCTCCTCGTGCTGAGTCTTCACTAAGCTTCTTTCACAACTATAGCAGCAGTAGCAGCAACCCATCATATCCAGGAAGTGAAGTGAAACAAGCAGCATTGGTGGAGACACCACAAGAGTCGCTTCATGCAATGGCGGAAGTAAAGTACGCGGGCCACCGCGAGAAGAAGAAGCGATTAACAAGCAGCCAGATTGACTTATTGGAGAGAAGCTTTCAGGAGGAGATAAAGTTGGACACTGACAGGAAGATGAAGCTTTCCAGGGAGCTTGGCCTCCAGCCTCGCCAAATTGCGGTTTGGTTCCAGAATAGGCGAACAAGGTGGAAGGCCAAGCAGCTTAAGCACTTGTACTTTGCCCTTAAACAAGAATTTGATCACATCTCCAATGAGAAGCACAAGCTTCAAGAAGAGGTTATGATGTTGAAGGCAAGGCTAAGAGAGCAAGCATTTAGAGCACATGTATCTGGTGTTTACACAGACATGTCTGGGGCAGAAACAGTAGAAAGCACGTCAGAGATGTTGCATGGATCCAAGGGAATGATTACCACCATGTCTTCAGCTATGAAGCACGGATTCTCATGGTGCCAGCGTATCCGTGTCGGACGCGAATCCGACACCAACACGCGGTGGATACTTCAAACGAGCGTATCGGCAGCGTGTCTTCTTGCGGTGCAGAATTTTGGTGGAGCTGTCACGAATCCGAACGAGTCTGACTCGATTCAGATGTTCATGAGACGGATCTTTGATCTTTCTGCTAGACTGCAAATCTTCAATTGA 804 0.4764 MEWNESTRSFAPRAESSLSFFHNYSSSSSNPSYPGSEVKQAALVETPQESLHAMAEVKYAGHREKKKRLTSSQIDLLERSFQEEIKLDTDRKMKLSRELGLQPRQIAVWFQNRRTRWKAKQLKHLYFALKQEFDHISNEKHKLQEEVMMLKARLREQAFRAHVSGVYTDMSGAETVESTSEMLHGSKGMITTMSSAMKHGFSWCQRIRVGRESDTNTRWILQTSVSAACLLAVQNFGGAVTNPNESDSIQMFMRRIFDLSARLQIFN* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1728 267 CDD homeodomain 63 121 IPR001356 GO:0003677
Ahy16g1728 267 PRINTS Lambda-repressor HTH signature 91 100 IPR000047 GO:0003677
Ahy16g1728 267 PRINTS Lambda-repressor HTH signature 100 116 IPR000047 GO:0003677
Ahy16g1728 267 SMART HOX_1 62 124 IPR001356 GO:0003677
Ahy16g1728 267 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 1 186 - -
Ahy16g1728 267 Gene3D - 59 125 - -
Ahy16g1728 267 SUPERFAMILY Homeodomain-like 50 121 IPR009057 -
Ahy16g1728 267 ProSitePatterns 'Homeobox' domain signature. 95 118 IPR017970 GO:0000981|GO:0006355
Ahy16g1728 267 ProSiteProfiles 'Homeobox' domain profile. 60 120 IPR001356 GO:0003677
Ahy16g1728 267 Coils Coil 126 153 - -
Ahy16g1728 267 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 1 186 IPR045224 GO:0003700
Ahy16g1728 267 Pfam Homeodomain 63 118 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1728 Ahy-Chr16 67561558 67563826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1728 1 150 Homeobox Transcription Factor Family AT5G03790 48.466 4.00e-41 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Ahy16g1728 Homeodomain 4.50E-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1728 - - ahf:112757138 505.753