Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1696 ATGGAGCAGCAGGTGGAAGAGGAACATGTGGTGCGCAGCAACAAAAATAACAATAATGATCACATGCAAATTATGATGAAGGGCAAGCGCACCAAGCGTCAGAGGCTACCTTCCCCACTTAGGTTAGCTATGGCCATGCCTTCTTCAACCTCTTCAACCTCCTCTTTCGGTTTGGATACCCCAACAACAACCGCAAGAACAGAAGATGAGGATAATAACGACGAAGACATGGCGAATTGCTTGATCCTCTTGGCTCAAGGCGGCGGAGGCCGGGGAACCCGCCATAATAACAAGAAAGAAAGCATATTCAACCTTTACGATTGCAAGACTTGTAACCGAAGCTTCCCTTCCTTCCAAGCTTTGGGAGGACACAGAGCCAGCCACAAGAAGCCCAAGATCTTAACAAACAGTAGTAGTGTTATTACCACACAAGAGAATTACAATAATGACCCTACAAGCACCGCCCTTACCTTGCAAATATCAAACAGCTCCTTGTACTGCCGCAGCATCACCACCACCAAAACAACGACCGTCATGGAAACCACTGCTCCTATTTCCAAAGCAAGTAAGGTTCACGAATGTTCCATTTGCGGTGCCGAATTCACCTCTGGCCAAGCCTTGGGTGGTCATATGAGGAGGCACAGGGGTTTGTTGACCGTTTCTTCCGCCACAGCGGCAACCACAACCACCACCACTACAACTACATCATCATCTATTAGTGGTGCAAATGCTGATCATCAAGAGACCAAGAACAATAATAATAATGTCAACAAGAATATTTTGAAGCTGGATCTCAATCTTCCGGCACCGGAAGATGATCATCACAACAGGGTACCAAAGTTCTCTTTCCAGTCCAAAGAGAAAGTTATTGTGTTCTCTTCTGCAGCTTCTCTCGTAGATTGCCATTATTAG 912 0.4616 MEQQVEEEHVVRSNKNNNNDHMQIMMKGKRTKRQRLPSPLRLAMAMPSSTSSTSSFGLDTPTTTARTEDEDNNDEDMANCLILLAQGGGGRGTRHNNKKESIFNLYDCKTCNRSFPSFQALGGHRASHKKPKILTNSSSVITTQENYNNDPTSTALTLQISNSSLYCRSITTTKTTTVMETTAPISKASKVHECSICGAEFTSGQALGGHMRRHRGLLTVSSATAATTTTTTTTTSSSISGANADHQETKNNNNNVNKNILKLDLNLPAPEDDHHNRVPKFSFQSKEKVIVFSSAASLVDCHY* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1696 303 MobiDBLite consensus disorder prediction 1 72 - -
Ahy16g1696 303 ProSitePatterns Zinc finger C2H2 type domain signature. 194 214 IPR013087 -
Ahy16g1696 303 MobiDBLite consensus disorder prediction 1 15 - -
Ahy16g1696 303 Coils Coil 239 259 - -
Ahy16g1696 303 SMART c2h2final6 192 214 IPR013087 -
Ahy16g1696 303 SMART c2h2final6 106 128 IPR013087 -
Ahy16g1696 303 MobiDBLite consensus disorder prediction 44 63 - -
Ahy16g1696 303 ProSiteProfiles Zinc finger C2H2 type domain profile. 192 219 IPR013087 -
Ahy16g1696 303 ProSiteProfiles Zinc finger C2H2 type domain profile. 106 133 IPR013087 -
Ahy16g1696 303 Pfam C2H2-type zinc finger 191 215 - -
Ahy16g1696 303 Pfam C2H2-type zinc finger 106 131 - -
Ahy16g1696 303 ProSitePatterns Zinc finger C2H2 type domain signature. 108 128 IPR013087 -
Ahy16g1696 303 SUPERFAMILY beta-beta-alpha zinc fingers 105 214 IPR036236 -
Ahy16g1696 303 MobiDBLite consensus disorder prediction 231 254 - -
Ahy16g1696 303 Gene3D Classic Zinc Finger 104 214 - -
Ahy16g1696 303 PANTHER ZINC FINGER PROTEIN ZAT5 8 303 - -
Ahy16g1696 303 PANTHER GATA ZINC FINGER DOMAIN-CONTAINING PROTEIN 15-LIKE 8 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1696 Ahy-Chr16 59206202 59207612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1696 16 303 C2H2 Transcription Factor Family AT5G03510 38.679 9.49e-61 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Ahy16g1696 zf-C2H2_6 2.00E-12 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1696 - - adu:107494043 515.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1696 16 59206202 59207612 Ahy19g2334 19 137443075 137444714 ECH
Ahy16g1696 16 59206202 59207612 Ahy16g1696 16 59206202 59207612 ECH
Ahy16g1696 16 59206202 59207612 Ahy18g0541 18 5266612 5268280 ECH
Ahy16g1696 16 59206202 59207612 Ahy13g0276 13 2797332 2798735 ECH
Ahy16g1696 16 59206202 59207612 Ahy6g1521 6 47870659 47872090 hybridization
Ahy16g1696 16 59206202 59207612 Ahy12g3028 12 119827169 119828313 PCT
Ahy16g1696 16 59206202 59207612 Ahy2g2613 2 102229244 102230388 PCT
Ahy12g3028 12 119827169 119828313 Ahy16g1696 16 59206202 59207612 PCT
Ahy2g2613 2 102229244 102230388 Ahy16g1696 16 59206202 59207612 PCT