Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1676 ATGGATCAGTCTCCGCTCGTTCCAGCTGAGGTGCCGGATTTCATTGGCGGCGGCGGCAGCAGCAGCAACACGAGGAACGTTTCCATGGTGAACGGTTACATTGTTTACACCAGAGCTAATAGGGGAAACCGGAATTTATGTAACGAAATTTCCAATACCAATGAATCTACGAAGTTCAGGATTCGCGAAGACGTAGAACCGAATGCCAAGCTTCCAATGAAAGAAAATAACGGAAAAAAAATTTTGGCGGGAAAGGAGAACGAGTGTTCCGAACCGAAACTCAAGCTCAGCGTTTCAATGGTTAGGCCATTTAAGCGGTTTACACGACGGTCGGCGGCACTGGAAGGGAAAGTCGTTTCGAATGATGATGGTGGAGAGGTGAGCGGGATATCGAGGAACAAGTTGGAAATGAAGATGTCGAAGAAGATTGTGGTCAACAAGACGCCCATGACGGTGAAGGAGCTCTTCCACACTGGTCTTCTTGATGGGGTCTCGGTGGTTTACATGGGCGGTATTAAGAAGGCTTCAGGATTACGGGGTGTTATCAGAAATCTAGGAATATTGTGCTCATGCTCTCTGTGCAATGAACGCAGGATTATTCCGCCTTCCAAATTCGAGGTCCATGCTTGTGGACAATACAGGAGAGCAGCAGAGTATATCTGCCTTGAAAATGGGAAGAGCTTGCTTGATCTATTGAGAACGTGCAGGGGAGTTCCTCTGTATGATTTGGAGGCGACAGTTCAAAACTTTCTTGGTTCTCCGCATGAAGAAAAACATTTTACTTGTAAAAGATGCAAAGGGTGTTTCCCTTTCTCATGTGCGGGAAGAGTGGGGCCCATATGCTGTTATTGTGTTGAATCGAGGAAATCTGAAGACAGTTCTGATAACGCTGTTAGCAAGAGAGTCAGGTCCCCCAGACCAATGTCTGTCTCCAATCCATCCAATGCTCCTGAGCTGTCTATTGCTTCAGAAAATAAAAGAAAAAGGAAGAAAAGAACAAAGTCATCAAAATGGGCTAACAAGTCGAAGTCTTCCAAGAGTGCTTCTATTCCTATTCTACCAAAGATGACGACTTCATGGAAAATGAGAAAGAAGAAGCTGTCAGGAAACTCAAAGATTCTGGAAGTTACTTCAAATGCAAAGTATTTATCCCCACAAAATAAGAGCAAATGGAAAATAACTAAGAAGGATCAGCGGTTGCATAAGTTAGTTTTTGAAGAGAATGGATTACCTGATGGAACTGAAGTTGGTTATTATGCCCGTGGGAAGAGATTGCTTGAAGGCTTTAAAATGGGCTCTGGAATTGTTTGCAGATGCTGCGACTCTGAGGTCAGCCCTTCACAGTTTGAGGCCCATGCAGGTTGCGCTTCTCGCAAGAAACCTTATGCTTACATTTATACATCAAATGGTGTATCTCTCCATGAGTTAGCAATATCTCTCTCCAAAGATCGAAAATATTTGGCAACAGACGATGATCTATGCATTGTTTGTTGGGATGGTGGAAATTTGTTGCTTTGTGATGGATGCCCAAGAGCATTTCATAAAGAATGTGCATCTCTATCAAGTATTCCACGCGGTGACTGGTACTGTGAATTTTGCCAAAACATGTTTCAGAGAGAGAAGTTTGTGGCGTACAATTCCAATGCTGTTGCAGCTGGAAGGGTTGAAGGAGTTGATCCTATCCAAGAGATAACAAACAGATGCATACGCATAGTCAAAGATGTTGAAGCTGACCTTGGTGCATGTGCTTTATGCAGAGGTGTTGACTTCAGCAGATCCGGCTTTGGCCCACGCACCATAATACTATGTGACCAGTGTGAAAAGGAATATCATGTTGGCTGTTTGAGGGAACATAAGATGGCATATTTGAAGGAATTGCCAGTGGGGAAGTGGCTTTGTTGTAATGATTGTACAAGAATACATTCTACTTTGGAGAACCTTCTGGCCATGGGTGCTGAGAGACTCCCTGAATCTCTACTGGGCATTATAAAGAAAAAGCAAGAGGAGAAAGGACTGGAACCCCTCAATGATATTGACATAAGATGGAAGCTTCTTAATGGCAAAATTGCTTCTCGTGAAACCAGGCCATTGCTTTTGGAGGCTGTTTCAATCTTCCACGAATGTTTCAGTCCCATAGTTGATGCAATTAGTGGACGGGACTTTATTCCAGCCATGGTTTATGGAAGGAATGTTCGGGGGCAGGAGTTTGGAGGAATGTATTGTGCAGTATTAACGGTCAATTCATATGTGGTATCTGTGGGCATGCTTCGAATTTTTGGCAAAGATATTGCCGAACTCCCCTTGGTTGCAACCACTAACAAGGACCACGGAAAGGGTTACTTCCAAACACTCTTCTCTTGCATTGAGAGGCTGCTTTCTTTCTTGAATGTGAAGAACCTTGTGCTACCAGCTGCAGAAGAAGCAGAATCGATATGGACAGATAAATTTGGATTTAGCAAGATGATACCAGACCAGGTGTTTATTCTGCTTTACTACTTTTTGCTTATCAGCTACAGAAAGAATTGCCATCAGATGGTGACATTCAAAGGTACAAATATGCTTCATAAAACGGTGCCTCCCTGCCGGATCATCCACAATCAATCATGGCAATCTGATATTTAA 2622 0.4348 MDQSPLVPAEVPDFIGGGGSSSNTRNVSMVNGYIVYTRANRGNRNLCNEISNTNESTKFRIREDVEPNAKLPMKENNGKKILAGKENECSEPKLKLSVSMVRPFKRFTRRSAALEGKVVSNDDGGEVSGISRNKLEMKMSKKIVVNKTPMTVKELFHTGLLDGVSVVYMGGIKKASGLRGVIRNLGILCSCSLCNERRIIPPSKFEVHACGQYRRAAEYICLENGKSLLDLLRTCRGVPLYDLEATVQNFLGSPHEEKHFTCKRCKGCFPFSCAGRVGPICCYCVESRKSEDSSDNAVSKRVRSPRPMSVSNPSNAPELSIASENKRKRKKRTKSSKWANKSKSSKSASIPILPKMTTSWKMRKKKLSGNSKILEVTSNAKYLSPQNKSKWKITKKDQRLHKLVFEENGLPDGTEVGYYARGKRLLEGFKMGSGIVCRCCDSEVSPSQFEAHAGCASRKKPYAYIYTSNGVSLHELAISLSKDRKYLATDDDLCIVCWDGGNLLLCDGCPRAFHKECASLSSIPRGDWYCEFCQNMFQREKFVAYNSNAVAAGRVEGVDPIQEITNRCIRIVKDVEADLGACALCRGVDFSRSGFGPRTIILCDQCEKEYHVGCLREHKMAYLKELPVGKWLCCNDCTRIHSTLENLLAMGAERLPESLLGIIKKKQEEKGLEPLNDIDIRWKLLNGKIASRETRPLLLEAVSIFHECFSPIVDAISGRDFIPAMVYGRNVRGQEFGGMYCAVLTVNSYVVSVGMLRIFGKDIAELPLVATTNKDHGKGYFQTLFSCIERLLSFLNVKNLVLPAAEEAESIWTDKFGFSKMIPDQVFILLYYFLLISYRKNCHQMVTFKGTNMLHKTVPPCRIIHNQSWQSDI* 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1676 873 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 578 640 IPR013083 -
Ahy16g1676 873 CDD PHD1_AIRE 493 533 - -
Ahy16g1676 873 Pfam PHD-finger 494 535 IPR019787 -
Ahy16g1676 873 SUPERFAMILY FYVE/PHD zinc finger 572 635 IPR011011 -
Ahy16g1676 873 ProSitePatterns Zinc finger PHD-type signature. 494 533 IPR019786 -
Ahy16g1676 873 PANTHER AUTOIMMUNE REGULATOR 25 864 - -
Ahy16g1676 873 MobiDBLite consensus disorder prediction 305 321 - -
Ahy16g1676 873 SMART PHD_3 581 638 IPR001965 -
Ahy16g1676 873 SMART PHD_3 493 534 IPR001965 -
Ahy16g1676 873 MobiDBLite consensus disorder prediction 294 354 - -
Ahy16g1676 873 SUPERFAMILY FYVE/PHD zinc finger 478 535 IPR011011 -
Ahy16g1676 873 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 732 819 IPR016181 -
Ahy16g1676 873 PANTHER ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN 25 864 - -
Ahy16g1676 873 MobiDBLite consensus disorder prediction 340 354 - -
Ahy16g1676 873 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 481 570 IPR013083 -
Ahy16g1676 873 MobiDBLite consensus disorder prediction 1 22 - -
Ahy16g1676 873 ProSiteProfiles Zinc finger PHD-type profile. 491 536 IPR019787 -
Ahy16g1676 873 Pfam Tify domain binding domain 432 478 IPR032308 -
Ahy16g1676 873 Pfam Tify domain binding domain 180 235 IPR032308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1676 Ahy-Chr16 52082223 52090774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1676 141 864 PHD Transcription Factor Family AT2G36720 52.973 0.0 780
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Ahy16g1676 TDBD 1.70E-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1676 - - gmx:100802562 1229.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1676 16 52082223 52090774 Ahy16g1676 16 52082223 52090774 ECH