Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1667 ATGTGCGTGTCTCTCTTTGATCTCGCCACTAGTGCTTGCTCTTCTCCGTGTGTTGCTGCGTTTCTCTCTTCGATCTTGCCTCAGCTGTGCAGGACTGAGAATCAAGATGATATAGATGCCGTAATTGTTGGTGTGCTTGTTGATCCAAAGGAGGCAAGAGCTGGAATCAGGGAGGTCCATTTTTTCCCTTTCAATCCTGGAGACAAGAGGACTGCTCTAACTTACATTGAATCTGATGGAAATTGGCATATATCCAGCAAAGGTGCTCCAGAGCAGATATTGAACCTCTGCAACTACAAAGAGGATGTGAAGAGAAAGGCTATGCAACTATTGTTAAGTTTGCTGAGCGTGGGCTCTGATCTTTGGGGGTTGCTAGACAGCTTCGGAAGTACCTGA 396 0.4621 MCVSLFDLATSACSSPCVAAFLSSILPQLCRTENQDDIDAVIVGVLVDPKEARAGIREVHFFPFNPGDKRTALTYIESDGNWHISSKGAPEQILNLCNYKEDVKRKAMQLLLSLLSVGSDLWGLLDSFGST* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1667 131 PANTHER CALCIUM-TRANSPORTING ATPASE 30 109 - -
Ahy16g1667 131 Pfam Cation transport ATPase (P-type) 46 99 - -
Ahy16g1667 131 PANTHER PLASMA MEMBRANE ATPASE 30 109 - -
Ahy16g1667 131 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 37 110 IPR023299 GO:0000166
Ahy16g1667 131 Gene3D - 15 118 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1667 Ahy-Chr16 51197137 51199739 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1667 30 106 Primary Pumps ATPases AT2G24520 81.818 6.22e-41 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1667 K01535 K14618 ahf:112754217 254.218