Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1635 ATGGAGGTGATTATTAGAAGGAAAAGCCTCAAGTCTCTGGTGACAAAGGTAGTTAAAGGTCTTGCATTCTTGGCCCTAAGTAAAAGGGCTTATCCCATAACTGACATCGACGACGACAGCGACGAAGAAATAGTAACATCGGTGCCGGAAGGGCATTTTGCGGTTATAGCAATGGAGGGTGGTGATGAAGAAGAGAAAAAGAGGTTCATGATTGAATTGAATTATTTGACGGATCCGGCGTTCTTGAAGCTTCTGGAGATGGCTAAGGAAGAATATGGGTTTCAACACAAAGGTGCTCTTGCTCTTCCATGCACCCCTCAACAACTTCGCAACGTTTTACATAATCATCAATTGTAA 357 0.4314 MEVIIRRKSLKSLVTKVVKGLAFLALSKRAYPITDIDDDSDEEIVTSVPEGHFAVIAMEGGDEEEKKRFMIELNYLTDPAFLKLLEMAKEEYGFQHKGALALPCTPQQLRNVLHNHQL* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1635 118 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 9 116 IPR003676 GO:0009733
Ahy16g1635 118 PANTHER F8A24.8 PROTEIN 9 116 - -
Ahy16g1635 118 Pfam Auxin responsive protein 40 113 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1635 Ahy-Chr16 45505137 45505863 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1635 39 116 Calmodulin-binding Proteins AT3G43120 40.909 5.78e-12 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1635 - K14488 gmx:102661602 115.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1635 16 45505137 45505863 Ahy6g1471 6 36266967 36267767 hybridization