Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1618 ATGAAGGTGGCTTTGAGTACACTCCTAGTCTTCATTTATAATTGTTCTGATCAAGTTCTTGCGACCCGAGAAAGAAGGCAAGCGAAATCCAGAGAACGTGCAGCAAAGCATGTTAGAGAAACGGTGCAAGCACGTGAAAGGTGGAAGATGGCAAAAGATATTGCCAAGAAGCGTACAATGGAGTCGTTGAATCGCACCTTCTCGCGAAGGAAGTCACAGAAGATGTCAGATCTTCCAAATACCATGGCAAATGTAGAGAACAACAAGGAGCCTAGCAACCTCTCCAAGATGATGGATTCCATTGAGAATGATCCCAACAGTCAGGAAGGCTTCGACGTGCAGATTGGAGATAAGAATGTGAAGAAGCAGCAGATGACAAAGGGAAAGAATCTGCATACACATAGCCAGATTTTGAGGTATGCTTATGGCCAGATTGAGAAGGAGAAAGCTCAGCAAGAGAAGAACACTAACTTGACATTCTCAGGAGTGATATCGATGGCCACCGAACAAGGAGAGGAAGTGAGAAAAAGGCCTGTGATTGAGATAGCTTTCAAGGACATAACTCTCACTTTGAAAGGGAAGAACAAGCATCTTCTTAGGTGTGTGTCCGGCAAGTTCATGCCAGGTCGAATTTCAGCTGTCATGGGACCCTCAGGGGCAGGGAAAACCACATTCCTTTCGGCTTTGGTAGGAAAAGCCAGAGGGTGCAATATAACAGGTGAAATTCTTATTAACGGAAAAAATGATTCCATTCACTGTTATAAGAAAATCACTGGTTTTGTGCCACAAGATGATATTGTCCATGGAAACTTGACAGTGGAGGAAAATCTTCGTTTTAGTGCAAGATGCAGACTATCGGCGGACTTGCCGAAAGCAGATAAGGTTTTGATTGTTGAGAGGGTAATTGAGTCCTTGGGACTTCAGCCAGTGAGGGATTCTCTAGTCGGCACAGTAGAGAAGCGAGGCATCTCCGGAGGACAGAGAAAACGTGTAAATGTTGGCCTGGAGATGGTGATGGAGCCTTCCTTGTTAATCTTAGATGAGCCTACAACTGGCCTTGACAGTGCATCTTCCAGTTTGCTACTTAAGGCTCTTCGACGCGAAGCTCTCGAAGGCGTTAACATTTGCATGGTACTTCATCAACCAAGCTATACTTTGTTTAGAATGTTTGATGATATAGTGTTTCTAGCCAAAGGTGGCCTTACTGCATATCATGGCCCTGTGAAAAATGTAGAAGAATACTTTGCCAGCATTGGGATTCCTGTGCCGGACCGTGTGAATCCTCCAGACCATTTCATTGACATTCTAGAAGGTTTGGTGAAACCGAGTGCAACAGGTGTAACTCATGAACAACTTCCTGTCAGATGGATGCTTCACAATGGATATGCAGTGCCACCAGATATGCTTCATTTTGTTGATCAAATCGCAGCGGCTTCTGGTGGCGCAACTGTGGTTCCTACAAGTCAGTCAATAAAGGTTACTGAGAATGAGCAATCTTTTTTCTCAGAGTTTTGGGAGGATTTGAGGGATAATATTCAGAGCCAACTAGATCGCCTTGAGGCGATCTTTATGACGTCGAAGGACTTATCGAACCGGAGAACTCCTAGTATAGCCAGGCAGTACAGATATTTTATTGGCCGGGTCGGTAAGCAGCGGCTGAGAGAGGCTAAATTACAAGCTGTAGACTATCTCCTTTTACTAGTTGCTGGTGCTATCTTGGGAATGCTCACTAAAGTGAATGATAACTCATTTGGCTCCCTTGGTTATACATTTACAATCATTGCCGTCTCTCTACTCTGCAAGATTGGTGCCCTAAGATCATTTTCTAATGACAAGTTAAATTACTGGAGGGAGAGCGCCTCTGGGATCAGTAGCCTGGCCCATTTTCTATCTAAAGACACAGTTGATCTTTTCAACACAATCATCAAACCGGTTGTTTTTCTATCCATGTTCTACTTTTTCAGCAATCCGAGGTCAAGCTTTGCAAGTAACTATGTAGTGTTGCTTTGTTTGGTGTACTGTGTGACTGGCATAGCTTATATATTCGCCATCTACTTCGCCTACAGTCTTGCACAGCTGTGGTCAGTGTTGCTTCCTGTGGTTATGACCCTCATTGCAAAACAAAACGACGATTCAATACTCATGCACATTATAATGAAAGTTTGCTACCCAAGATGGGCTTTGGAGGCCTTTGTCATTGCAAATGCTGAAAGGTACACTGGGGTGTGGCTAATAACACGATGCACTTCACTGCTGGTGAGTAGGTATAATCTTGGGGACTGGGACTTTTGTCTGATTGCCCTTGTTGTTTATGGTATCGTTGCCAGAATTGTGGCCTTCTTTTGCCTTGTTATTTCCCAAAAGAGGTGA 2370 0.4405 MKVALSTLLVFIYNCSDQVLATRERRQAKSRERAAKHVRETVQARERWKMAKDIAKKRTMESLNRTFSRRKSQKMSDLPNTMANVENNKEPSNLSKMMDSIENDPNSQEGFDVQIGDKNVKKQQMTKGKNLHTHSQILRYAYGQIEKEKAQQEKNTNLTFSGVISMATEQGEEVRKRPVIEIAFKDITLTLKGKNKHLLRCVSGKFMPGRISAVMGPSGAGKTTFLSALVGKARGCNITGEILINGKNDSIHCYKKITGFVPQDDIVHGNLTVEENLRFSARCRLSADLPKADKVLIVERVIESLGLQPVRDSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTTGLDSASSSLLLKALRREALEGVNICMVLHQPSYTLFRMFDDIVFLAKGGLTAYHGPVKNVEEYFASIGIPVPDRVNPPDHFIDILEGLVKPSATGVTHEQLPVRWMLHNGYAVPPDMLHFVDQIAAASGGATVVPTSQSIKVTENEQSFFSEFWEDLRDNIQSQLDRLEAIFMTSKDLSNRRTPSIARQYRYFIGRVGKQRLREAKLQAVDYLLLLVAGAILGMLTKVNDNSFGSLGYTFTIIAVSLLCKIGALRSFSNDKLNYWRESASGISSLAHFLSKDTVDLFNTIIKPVVFLSMFYFFSNPRSSFASNYVVLLCLVYCVTGIAYIFAIYFAYSLAQLWSVLLPVVMTLIAKQNDDSILMHIIMKVCYPRWALEAFVIANAERYTGVWLITRCTSLLVSRYNLGDWDFCLIALVVYGIVARIVAFFCLVISQKR* 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1618 789 Pfam ABC-2 type transporter 380 788 IPR043926 GO:0140359
Ahy16g1618 789 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 3 784 - -
Ahy16g1618 789 Gene3D - 169 418 IPR027417 -
Ahy16g1618 789 PANTHER WHITE-BROWN COMPLEX HOMOLOG PROTEIN 30-RELATED 3 784 - -
Ahy16g1618 789 MobiDBLite consensus disorder prediction 73 92 - -
Ahy16g1618 789 SMART AAA_5 208 400 IPR003593 -
Ahy16g1618 789 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 405 IPR027417 -
Ahy16g1618 789 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 182 423 IPR003439 GO:0005524
Ahy16g1618 789 ProSitePatterns ABC transporters family signature. 323 337 IPR017871 GO:0005524
Ahy16g1618 789 CDD ABCG_EPDR 180 406 - -
Ahy16g1618 789 MobiDBLite consensus disorder prediction 65 92 - -
Ahy16g1618 789 Pfam ABC transporter 201 350 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1618 Ahy-Chr16 43858361 43862972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1618 209 402 Calmodulin-binding Proteins AT2G36910 29.208 9.03e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1618 - - gmx:100812387 1196.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1618 16 43858361 43862972 Ahy16g1618 16 43858361 43862972 ECH