Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1616 ATGAAGGCAAAGTTTCTGAGAGAGTACCTTAACAAGTGTAAGAAACTGGTGGTGAGAGGAGCTACCAATCCTTCTTGTTCTTCCTATGAATACTTCTGTGAATGGTTTTTGTGGCCTTCCATGCACAAAAGATGCTCCATTCCAAGTGATGTTCCAAAGGGACACTTGGTTGTGTATGTAGGAGAGAATCGCAAGAGATATGTGATCAAGGTTACACTCCTCAACCATCCACTCTTCAAGGCCTTGCTTGATCAAGCTCAGGAAGAATACGATTTCGTCGCCGATTCAAAACTATGTATTCCTTGTGATGACCACTTCTTCCTAAGTGTCCTCCAATGTGCGAGCTCGCCGAAGAAGGAAACGGTGTTTGTTCGGCTCTGA 381 0.4436 MKAKFLREYLNKCKKLVVRGATNPSCSSYEYFCEWFLWPSMHKRCSIPSDVPKGHLVVYVGENRKRYVIKVTLLNHPLFKALLDQAQEEYDFVADSKLCIPCDDHFFLSVLQCASSPKKETVFVRL* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1616 126 Pfam Auxin responsive protein 44 112 IPR003676 GO:0009733
Ahy16g1616 126 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 2 121 - -
Ahy16g1616 126 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 2 121 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1616 Ahy-Chr16 43262134 43266275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1616 49 116 Calmodulin-binding Proteins AT4G34750 50.000 7.65e-21 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1616 K14488 - gmx:100812927 175.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1616 16 43262134 43266275 Ahy16g1616 16 43262134 43266275 ECH
Ahy16g1616 16 43262134 43266275 Ahy6g1452 6 34023496 34023876 hybridization