Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1604 ATGAGTTCTTTAGCAGACATTTTTGCTTCTACTAATAGAATTCTTACTCGAATACATAGGGACTGGCAGAGTGAGCATGAAAGATGGCACCAACTCTACCTTGGACCTTTTGATGGGATTCTTAGTAGCAGCTTGACCTGTCAGAGTTGCTCATCCCAGGAGGAGAAAGGTTCCAAGATCTCAATTAACTTGGAACAATTTGATTGTTTGCCTCTTTCACCTGTACTTAGTGGTTCCACCCTGGTTACAGGATTTTTGAAAAACCTCAGGACAGAAAAAATTTCTAGAAGTAGAACTCCTCAAATTTTTATCATCAGAATCAATGTTGCATCAAATGGTGACACAAGCAACAAAATTGGGACCTATAGCATTACCTTGTGTACCAATTTTCACAATGTACCTTTTTATGTGGCTGCACCGCTGACTTCAATTGATCTATCACTTTCTTTCGGAGAAGAAATTGTCATCGAGGAGAGATCTCCGAAGGAGTTGTTGAACATGCGAGGAGGACTTGGAGAGCAAGTTGCTGCCTCATGA 537 0.4078 MSSLADIFASTNRILTRIHRDWQSEHERWHQLYLGPFDGILSSSLTCQSCSSQEEKGSKISINLEQFDCLPLSPVLSGSTLVTGFLKNLRTEKISRSRTPQIFIIRINVASNGDTSNKIGTYSITLCTNFHNVPFYVAAPLTSIDLSLSFGEEIVIEERSPKELLNMRGGLGEQVAAS* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1604 178 Pfam Initiation factor 2 subunit family 108 169 IPR000649 GO:0044237
Ahy16g1604 178 PANTHER METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE 109 178 - -
Ahy16g1604 178 SUPERFAMILY NagB/RpiA/CoA transferase-like 109 169 IPR037171 -
Ahy16g1604 178 Gene3D - 103 178 IPR042529 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1604 Ahy-Chr16 41410489 41412309 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1604 98 177 Eukaryotic Initiation Factors Gene Family AT2G05830 66.250 2.54e-32 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1604 K08963 - aip:110263737 261.536