Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1603 ATGGTGCAACAACAAGTTTCAAGTTCTGTTCAGACTTACAAGGTTAGCTCTTTGGATAGCAAGAAGTCTTTAAAGTCTAGTTTTCTTTCTTTCATTGGAGCACATGAGATTTTCATGCCAGAGACATGGAAAACAGCATTGACTGAGTTAGTTGCAACTGCTTCTCTAATGTTCACACTGACATCATCAATCATAGCATGTTTGGATTCACATGAAGTTGCTCCAAAGCTTCTAGTCCCTCTTGCAGTGTTCATCATAGCCTTCTTGTTCCTAATAGTCACAATTCCACTCTCTGGAGGTCACATGAGTCCTGTTTTCACATTCATAGCAGCACTAAAGGGTGTTGTTACTCTTGTACGTGCACTAATTTATGTCATAGCACAATGCATTGGTTCAATTATTGGTTTCATTATGCTAAAATGTGTCATGGATCCAAAATTGGAACACAAATATTCATTGGGAGGATGTGCAATTGGTAATGATAGTGATAAAGGACTAGGATCAAAGCCACAAGTTGCATTGTTAGTAGAATTTTCATGCACCTTTTTGGTGCTATTTATTGGTATTACCTTGGGATTTGATAAGAAAAGGTCAAAGGAATTAGGATTACCTATGGTGTGTGTTGTGATTGCTGGGGCAATGGCATTAGCAGTGTTTGTGTCTATAACTGTTACTGGGCAACCGAGCTATGCAGGTGTTGGACTTAACCCAGCAAGATGTTTAGGCCCAGCTTTACTAAAAGGTGGATTATTGTGGAATGGACATTGGATTTTTTGGGTTGGGCCTTTCTTGGCCTGTATAACATATTATGGAGTATCTATTAATTTGCCAAAGGAGAGTATCACTTTGGAAAATGAAGAATATGATGTGTTGAGTTTAGCTTTGGGCCATAGTAAGAGTATTTCTAGGAGTGCTGTCTCAAATGATCTTCAAGTTTGA 939 0.3855 MVQQQVSSSVQTYKVSSLDSKKSLKSSFLSFIGAHEIFMPETWKTALTELVATASLMFTLTSSIIACLDSHEVAPKLLVPLAVFIIAFLFLIVTIPLSGGHMSPVFTFIAALKGVVTLVRALIYVIAQCIGSIIGFIMLKCVMDPKLEHKYSLGGCAIGNDSDKGLGSKPQVALLVEFSCTFLVLFIGITLGFDKKRSKELGLPMVCVVIAGAMALAVFVSITVTGQPSYAGVGLNPARCLGPALLKGGLLWNGHWIFWVGPFLACITYYGVSINLPKESITLENEEYDVLSLALGHSKSISRSAVSNDLQV* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1603 312 Pfam Major intrinsic protein 40 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy16g1603 312 PRINTS Major intrinsic protein family signature 83 107 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy16g1603 312 PRINTS Major intrinsic protein family signature 44 63 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy16g1603 312 PRINTS Major intrinsic protein family signature 120 139 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy16g1603 312 PRINTS Major intrinsic protein family signature 256 276 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy16g1603 312 PRINTS Major intrinsic protein family signature 217 239 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy16g1603 312 PRINTS Major intrinsic protein family signature 176 194 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy16g1603 312 PANTHER AQUAPORIN-LIKE 13 304 - -
Ahy16g1603 312 SUPERFAMILY Aquaporin-like 39 268 IPR023271 -
Ahy16g1603 312 Gene3D Glycerol uptake facilitator protein. 3 286 IPR023271 -
Ahy16g1603 312 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 13 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1603 Ahy-Chr16 41015283 41018980 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1603 95 288 Major Intrinsic Protein MIP AT1G17810 31.863 1.60e-20 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1603 K09866 - gmx:100804160 436.032