Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1600 ATGAGAATGGCATCCAGTAGCAGGGGTCAAGGCGGAATTCAACAGCTGTTGGCTGCTGAACAAGAAGCACAGCAGATTGTGAATGCTGCAAAGAATGAAAAACTGGCTAGGCTGAAACAGGCCAAAGATGAGGCTGAAAAGGAGATTGCTGAACATCGAGCTCAGCTTGAGTACCAGTTTCAGAAGAAAGTTTCAGAGAGTAGTGGAGATTCTGGTGCTAATGTCAAGCGACTTGAGCAAGAAACTGAGTCAAAGATCCATCACCTGAAATCCGAGTCTTCAAGAATATCGGGGGATGTTGTCAGCATGCTCCTCAGTTATGTAACAACTGTGAAAAATTAG 342 0.4474 MRMASSSRGQGGIQQLLAAEQEAQQIVNAAKNEKLARLKQAKDEAEKEIAEHRAQLEYQFQKKVSESSGDSGANVKRLEQETESKIHHLKSESSRISGDVVSMLLSYVTTVKN* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1600 113 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 6 113 IPR005124 GO:0016471|GO:0046961|GO:1902600
Ahy16g1600 113 Gene3D - 3 113 - -
Ahy16g1600 113 MobiDBLite consensus disorder prediction 60 75 - -
Ahy16g1600 113 Pfam Vacuolar (H+)-ATPase G subunit 10 112 IPR005124 GO:0016471|GO:0046961|GO:1902600
Ahy16g1600 113 PANTHER V-TYPE PROTON ATPASE SUBUNIT G1 6 113 - -
Ahy16g1600 113 MobiDBLite consensus disorder prediction 60 93 - -
Ahy16g1600 113 MobiDBLite consensus disorder prediction 76 93 - -
Ahy16g1600 113 Coils Coil 13 62 - -
Ahy16g1600 113 TIGRFAM V_ATP_synt_G: V-type ATPase, G subunit 7 112 IPR005124 GO:0016471|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1600 Ahy-Chr16 40942429 40944681 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1600 11 113 Primary Pumps ATPases(2) AT4G23710 67.961 1.52e-45 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1600 K02152 - gmx:100305477 182.185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1600 16 40942429 40944681 Ahy16g1600 16 40942429 40944681 ECH
Ahy16g1600 16 40942429 40944681 Ahy12g3084 12 120312940 120315295 PCT
Ahy16g1600 16 40942429 40944681 Ahy2g2667 2 102715015 102717370 PCT
Ahy12g3084 12 120312940 120315295 Ahy16g1600 16 40942429 40944681 PCT
Ahy2g2667 2 102715015 102717370 Ahy16g1600 16 40942429 40944681 PCT