Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1599 ATGAAGATTATTCATTCATGTTTTTCTACTTGTTTCTCTGTCAAAGAAGAAACCAAACAAGAAGAAGAGCGGAATAAGGAAGACGAGAGTGATGAAAGCTTTCGGGTCTTCACTTACAGGGAATTGGCATCAGCCACCCGTGGTTTTCATCCCTCTCACAAAATTGGAGAAGGAGGATTTGGTTCTGTCTACAAGGGGATTGATTGGTTTGTTGTGAAGGGGGGGCTCCGGGATGGGACATTGGTGGCAGTGAAAGTGCTTTCCATAGAGATGGAGTCCATGCGAGGAGAGAGGGAGTTTGTGGCTGAATTGGCTACGCTTGCAAATATCAAGCACCAAAATTTGGTGATTCTTAGAGGGTGCTGTGTAGAAGGAGCAAAAAGATATCTAGTCTATGATTACATGGAGAACAACAACCTTCACCACACTTTCTTAGGTTCGGAGGAAAGTAGGATGAGATTCAATTGGGAAGCAAGGAAGGAAGTGTCCATAGGTGTGGCCTCTGTTCTTGCGTTTCTTCATGAGGAACTTAAGCCTCATATTCTGCATAGAGATATCAAATCAAGCAACATCCTTCTTGATCGAGATTTCACACCAAAGGTCTCGGATTTTGGTCTCGCAAAGCTACTAAGAGATGACAAGTCTTATATCAGCACTCGAGTTGCTGGGACATTGGGTTATCTTGCTCCAGAGTATGCTAGTTCCGGACAAGTGTCGCGAAAATCAGATGTTTACAGCTTTGGAGTGCTACTCTTAGAAATTATTAGTGGAAGACCCGTGGTTGGTGCTTATGAAGACATGGAACGTTTCATAGTAGAGAAGGCTTGGGCAGCATATGGAGAGAATGATCTATTAAAAATGGTTGATCCAGTGCTAGATATGAACTATCCTGGGGAGGAGGCGAAACGATTCCTCATGGTGGGTTTGCTTTGCGTTCAAGAAACTGCAAAGATTAGACCGCGGATGCCAGAGGTTGTAGACATGTTGAAGAACAAAAAGGACATGGAATGTGTACAGATTTCGAAACCAGGTTTTGTTGAGGATCTAAGGAACATTAGAATCAGGCAGGAAGTAATGCACTCATCGGAAGAATCAAGTTCTGGTGGAGCAACATTTGCAAGTAGTTCATCATTGACTACTTCTACTCTTGCCCGTTAA 1158 0.4335 MKIIHSCFSTCFSVKEETKQEEERNKEDESDESFRVFTYRELASATRGFHPSHKIGEGGFGSVYKGIDWFVVKGGLRDGTLVAVKVLSIEMESMRGEREFVAELATLANIKHQNLVILRGCCVEGAKRYLVYDYMENNNLHHTFLGSEESRMRFNWEARKEVSIGVASVLAFLHEELKPHILHRDIKSSNILLDRDFTPKVSDFGLAKLLRDDKSYISTRVAGTLGYLAPEYASSGQVSRKSDVYSFGVLLLEIISGRPVVGAYEDMERFIVEKAWAAYGENDLLKMVDPVLDMNYPGEEAKRFLMVGLLCVQETAKIRPRMPEVVDMLKNKKDMECVQISKPGFVEDLRNIRIRQEVMHSSEESSSGGATFASSSSLTTSTLAR* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1599 385 ProSitePatterns Serine/Threonine protein kinases active-site signature. 181 193 IPR008271 GO:0004672|GO:0006468
Ahy16g1599 385 Gene3D Transferase(Phosphotransferase) domain 1 135 343 - -
Ahy16g1599 385 PANTHER RECEPTOR-LIKE KINASE 6 377 - -
Ahy16g1599 385 CDD STKc_IRAK 55 331 - -
Ahy16g1599 385 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 6 377 - -
Ahy16g1599 385 ProSitePatterns Protein kinases ATP-binding region signature. 55 85 IPR017441 GO:0005524
Ahy16g1599 385 ProSiteProfiles Protein kinase domain profile. 49 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g1599 385 Gene3D Phosphorylase Kinase; domain 1 9 134 - -
Ahy16g1599 385 SUPERFAMILY Protein kinase-like (PK-like) 30 343 IPR011009 -
Ahy16g1599 385 MobiDBLite consensus disorder prediction 360 385 - -
Ahy16g1599 385 Pfam Protein tyrosine and serine/threonine kinase 52 329 IPR001245 GO:0004672|GO:0006468
Ahy16g1599 385 SMART serkin_6 49 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g1599 385 MobiDBLite consensus disorder prediction 361 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1599 Ahy-Chr16 40909742 40912404 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1599 19 378 Receptor kinase-like Gene Family AT1G07650 43.700 1.59e-88 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy16g1599 PK_Tyr_Ser-Thr 1.50E-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1599 - - gmx:100813945 497.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1599 16 40909742 40912404 Ahy16g1599 16 40909742 40912404 ECH
Ahy16g1599 16 40909742 40912404 Ahy6g1437 6 29726313 29729005 hybridization
Ahy16g1599 16 40909742 40912404 Ahy12g3086 12 120324675 120327557 PCT
Ahy16g1599 16 40909742 40912404 Ahy2g2669 2 102726750 102729632 PCT
Ahy12g3086 12 120324675 120327557 Ahy16g1599 16 40909742 40912404 PCT
Ahy2g2669 2 102726750 102729632 Ahy16g1599 16 40909742 40912404 PCT