Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1597 ATGGAAGCCAGCAGCAGTGTCGTCCAGGACGCATGGTTATGGAGTGGTTCAAGAAAAATTTTATTGACGGAAGAAAGCGATGTTGGTGATGTTGACATGCAGGATGAAATGTATGATATGGGAGTTGAGGCAGATGAAGCTCTTGTGCAGGTGGAGGGGACAGCTAGTGGATCCCCAGACCAGTTGATAAACCTGGAAGGTGTTACTGTAGATGATGTTCTTCAAATAGAATTCAGCACTCCCGAAGAAGCAAGTGGTTTCTACAACAACTATAATCGACTGAAAGGCAGGGTTTTCGAGAGAAGAAATGGTTGGAAAAAATTGGATAGGAAAAGGGAGCATAAGGTAGTCACTCGTTGTGGGTGTCTCGCTGAGATGAGGATTAAGAAAAAAGATGAAACCGGGAATTGGTACGTGTCGCGGTTCATTGATGAACATAACCACGAGATGGTATCTGAAAAGTTTGTAAATTATCTAAGATCACATAGGAAGATATCAGAGGTTGAGATTGCTCAGCTGACTAATATGAGGGGAATTGGGATTAGTATTCCAAAGATATACGAATCCTTTGCAGCACAGCTTGGAGGTTTTAATAAGGTTTCTTTCACGAAACAAGATATGTATAACGAGATTAGGAGGCAAAGAGAATTGCAAGGTGGAGATGTGAATGCTGCTATTAGGTTTTTGGAGGGGGTTGCTCGTGTAGATGGTAGAATGTTTTGGCGGTATAAGGTGGGATCGGAAGAGCACTTACACGATCTTTTTTGGAGTGATGGTCGTAGTCAGGATGATTATGCTGTTTTTGGGGATGTGCTTGCTTTTGATGCAACTTATGGACGTAATAAGTACAACCTACCGGTGGTGGTGTTCTCAGGAGTTAATCATCACAACCAAACCTATGTGTTTGCCACGGCAATGGTTTCATGTGAGTCTCAAGAGTCATATATTTGGGTTTTACAATAA 963 0.4216 MEASSSVVQDAWLWSGSRKILLTEESDVGDVDMQDEMYDMGVEADEALVQVEGTASGSPDQLINLEGVTVDDVLQIEFSTPEEASGFYNNYNRLKGRVFERRNGWKKLDRKREHKVVTRCGCLAEMRIKKKDETGNWYVSRFIDEHNHEMVSEKFVNYLRSHRKISEVEIAQLTNMRGIGISIPKIYESFAAQLGGFNKVSFTKQDMYNEIRRQRELQGGDVNAAIRFLEGVARVDGRMFWRYKVGSEEHLHDLFWSDGRSQDDYAVFGDVLAFDATYGRNKYNLPVVVFSGVNHHNQTYVFATAMVSCESQESYIWVLQ* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1597 320 Pfam FAR1 DNA-binding domain 102 151 IPR004330 -
Ahy16g1597 320 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 98 320 IPR031052 GO:0006355
Ahy16g1597 320 PANTHER OS02G0262500 PROTEIN 98 320 - -
Ahy16g1597 320 Pfam MULE transposase domain 271 320 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1597 Ahy-Chr16 40886121 40888735 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy16g1597 FAR1 5.00E-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1597 - - aip:107620408 426.402