Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1583 ATGGACAAGGATACTAGTTTGGAAATCCATCTCCCTCCTGGATTTAGATTCCACCCTTCTGATGAAGAGTTAATTGTTCACTATCTAAGAAACAAAGTCACTTCTTCACCACTTCCTGCCTCATTCATAGCAGAGATAGACCTCTACAAGTTCAATCCATGGGAGCTTCCAAGCAAAGCTTTGTTTGGGGAAGAAGAGTGGTATTTCTTTACTCCAAGAGAGAGGAAGTACCCAAATGGAGTGAGACCAAACAGAGCAGCTGGTGCAGGTTACTGGAAGGCCACTGGAACTGACAAACCAATTATCACGTCATGTGGTATGAAGAGCATTGGAGTGAAGAAAGCCCTTGTCTTCTACAAGGGACGTCCCCCAAAGGGATCCAAAACTGATTGGATCATGCATGAGTATAGGTTGCATGATTCACTCCTCTCAAATTCTCACAAAAGAGGCTCCATGAGACTTGATGAGTGGGTGCTATGCCGGGTGAGACAGAAAACAGGCAGCCCAAGAAGCACTTTAGAAGATCCAAGTGAACTACTTTATGAACCAACAAAAAAGATTCAACAAATGAATGATGAGAACTTCAATCCTGAACTAGTAAAAGCCTCCATTGTGCACAACGAATTTCCAATGTTACCTTATATTCTGGCTTCTAGGAGTACTTTGCCTAATTCCATTGGTGTGTCCTCAAGCACAGGCTTTGTTAGAAATTATGATATGAAAGAATATGGTTCAGTGCATGAAGACAACAACTTGAATGTAATAGGAGCACAGTTCTTAGCATCTGCAATGGAGGGCTTGTATAATAATCCTTTGAAGAGAAAATTCATTGAAGAAGAAGAAAACCATTTGGAATATGCTCCCCCAAATAAGAAAATAAGCCTAGAACTTGGTGATGATGTTGATAATAGTGATGATAAGCCAAGTCTTGTGATGGATACAAACAAAGGCTACAATTTTGGCTTCTTTGATCAGTGGAATTCAATCATACAACCTCAAGAGCTTAACAGCTTAGCCTTCATGGGATATTCATGA 1035 0.4058 MDKDTSLEIHLPPGFRFHPSDEELIVHYLRNKVTSSPLPASFIAEIDLYKFNPWELPSKALFGEEEWYFFTPRERKYPNGVRPNRAAGAGYWKATGTDKPIITSCGMKSIGVKKALVFYKGRPPKGSKTDWIMHEYRLHDSLLSNSHKRGSMRLDEWVLCRVRQKTGSPRSTLEDPSELLYEPTKKIQQMNDENFNPELVKASIVHNEFPMLPYILASRSTLPNSIGVSSSTGFVRNYDMKEYGSVHEDNNLNVIGAQFLASAMEGLYNNPLKRKFIEEEENHLEYAPPNKKISLELGDDVDNSDDKPSLVMDTNKGYNFGFFDQWNSIIQPQELNSLAFMGYS* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1583 344 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 2 298 - -
Ahy16g1583 344 PANTHER NAC TRANSCRIPTION FACTOR 56 2 298 - -
Ahy16g1583 344 ProSiteProfiles NAC domain profile. 11 165 IPR003441 GO:0003677|GO:0006355
Ahy16g1583 344 SUPERFAMILY NAC domain 9 165 IPR036093 GO:0003677|GO:0006355
Ahy16g1583 344 Pfam No apical meristem (NAM) protein 12 138 IPR003441 GO:0003677|GO:0006355
Ahy16g1583 344 Gene3D NAC domain 20 168 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1583 Ahy-Chr16 39431881 39436232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1583 10 174 NAC Transcription Factor Family AT1G61110 69.942 5.85e-85 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy16g1583 NAM 1.30E-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1583 - - gmx:100788799 486.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1583 16 39431881 39436232 Ahy16g1583 16 39431881 39436232 ECH
Ahy16g1583 16 39431881 39436232 Ahy6g1424 6 27878195 27882673 hybridization