Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1581 ATGAGCGTCATCGACCTCCTCACCAGAGTCGACTCCATTTGCAAGAAGTACGACAAGTACGACGTCGACAGGCAGAAGGACGCCAACATCTCCGGTGACGATGCCTTCGCCAGGCTCTACGCCGTCGTCGACGCTGACATCGAGGCTGCGCTTCAGAAAGCAGAACAAGCTTCGAAGGAGAAAGGTAAGGCATCTGCTGTAGCGATTAATGCGGAGATTCGTCGTACCAAGGCTAGATTACTGGAAGAGGTCCCTAAACTGCAGAGGCTGGCTATGAAAAAGGTAAAGGGGCTTTCATCGCAAGAATTTGCTGCCCGTAATGATCTAGTTCTTGCATTGCCAGAGAGGATACAAGCTATCCCAGACGGGACCCCTGCAGCACCCAAGCAAACTGGTGGTTGGACAGCTTCTGCATCACGTCCTGAAATCAAATTCGATTCTGATGGGCGATTTGATGATGAGTACTTCCAACAAACTGAGGAATCTAGCCGATTTAGGCAGGAGTATGAAATGCGTAGAATGAAACAGGATCAAGGTTTGGATGTGATAGCAGAAGGATTGGATACCTTGAAAAACATGGCGTCTGATATGAATGAGGAACTGGATAGACAAGTTCCTCTGATGGATGAGATTGATACTAAGGTGGACAAAGCATCTTCTGACCTTAAGAATACCAATGTTAGACTTAAAGACACAGTGATGCAGCTTCGTTCCAGTCGAAACTTCTGTATTGATATTGTTTTGTTGATTATAATTTTGGGGATAGCTGCCTATCTCTATAACGTGCTAAAGAAGTGA 798 0.4624 MSVIDLLTRVDSICKKYDKYDVDRQKDANISGDDAFARLYAVVDADIEAALQKAEQASKEKGKASAVAINAEIRRTKARLLEEVPKLQRLAMKKVKGLSSQEFAARNDLVLALPERIQAIPDGTPAAPKQTGGWTASASRPEIKFDSDGRFDDEYFQQTEESSRFRQEYEMRRMKQDQGLDVIAEGLDTLKNMASDMNEELDRQVPLMDEIDTKVDKASSDLKNTNVRLKDTVMQLRSSRNFCIDIVLLIIILGIAAYLYNVLKK* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1581 265 MobiDBLite consensus disorder prediction 121 146 - -
Ahy16g1581 265 CDD SNARE_Qc 175 230 - -
Ahy16g1581 265 SUPERFAMILY SNARE fusion complex 165 230 - -
Ahy16g1581 265 ProSitePatterns Syntaxin / epimorphin family signature. 176 215 IPR006012 GO:0005484|GO:0006886|GO:0016020
Ahy16g1581 265 Pfam SNARE domain 207 256 IPR000727 -
Ahy16g1581 265 SMART tSNARE_6 165 232 IPR000727 -
Ahy16g1581 265 PANTHER SYNTAXIN 1 261 IPR045242 -
Ahy16g1581 265 Coils Coil 40 60 - -
Ahy16g1581 265 Gene3D - 170 231 - -
Ahy16g1581 265 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 170 232 IPR000727 -
Ahy16g1581 265 PANTHER SYNTAXIN-73 1 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1581 Ahy-Chr16 39366121 39369393 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1581 1 264 SNARE and Associated Proteins AT3G09740 78.947 2.36e-158 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1581 K08506 - gmx:100819272 466.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1581 16 39366121 39369393 Ahy16g1581 16 39366121 39369393 ECH