Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1576 ATGGCTGACGAGGACTTCGATTTCACCGATAAAGTTCCTCCTTCCCTCGATCGCGCGGGAAATTCTGCATCCCAAGGGTTCAACCCAGGCTTAATAGTTCTCATTGTTGTTTTTGGGTTGGTGCTTGCGTTCCTCATTGGAAATTTTGTGCTCTACACATATGCACAGAAGAACCTCCCTCCGAGAAAAAAGAAGCCAGTGTCAAAGAAGAAGATGAAGAGGGAGAGACTGAAACAAGGCGTCTCTGCACCTGGAGAATAA 261 0.4674 MADEDFDFTDKVPPSLDRAGNSASQGFNPGLIVLIVVFGLVLAFLIGNFVLYTYAQKNLPPRKKKPVSKKKMKRERLKQGVSAPGE* 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1576 86 MobiDBLite consensus disorder prediction 1 25 - -
Ahy16g1576 86 MobiDBLite consensus disorder prediction 60 86 - -
Ahy16g1576 86 PANTHER DNA-BINDING PROTEIN S1FA2 4 86 IPR006779 GO:0003677|GO:0005634|GO:0006355
Ahy16g1576 86 Pfam DNA binding protein S1FA 22 86 IPR006779 GO:0003677|GO:0005634|GO:0006355
Ahy16g1576 86 MobiDBLite consensus disorder prediction 62 76 - -
Ahy16g1576 86 PANTHER DNA-BINDING PROTEIN S1FA1-RELATED 4 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1576 Ahy-Chr16 38963933 38965805 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Ahy16g1576 S1FA 2.60E-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1576 - - adu:107493441 155.221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1576 16 38963933 38965805 Ahy6g1419 6 27352809 27354622 hybridization