Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1564 ATGGCGCCTTCTTCTTCTTCAACTTCCACTGATCAAGCCTCTACAAAGAAGGTCAGAAAGCCTTACACCATTACCAAATCCAGAGAGAGCTGGTCCGACGAAGAACACGACAAGTTCCTCGAAGCTCTTCAACTATTTGACAGAGATTGGAAGAAAATTGAGGATTTTGTGGGCTCAAAAACTGTTATTCAGATTCGTAGCCATGCCCAAAAGTACTTCTTGAAAGTTCAAAAGAACGGGACAACTGCACATGTGCCTCCTCCTCGTCCTAAGCGAAAAGCTGCTCACCCTTATCCACAAAAGGCAGCAAAAAATGTAACATGGGATGAAAATTCAATGCTCATGAATGCTGAATCCAATAAACTCATGCCCTGCCAGGATGAGCTCATCACAAATCTTACTGGAAATGAAGATGATATTGGATCAAGGGGGATTAGAATGCCGGCGGCTACTGAGATGCCAAATCATGGAAAACAAGCTTGTGTAATTCCTGGTTTGCCGGATTTTGCTGAAGTTTACAGCTTTATTGGAAGCGTTTTTGATCCTGACACTAGAGGCCATGTTCATAAGCTGAAGGAAATGGATCCTATAAATTTTGAAACTGTTTTGTTGTTAATGAAAAATCTCACAATCAACTTGTCTAGCCCTGACATTGAGCCCTTTAAGAAGGCATTGTCATTATATGATGTCAATACAAAGACAGTTGGAATTGAATGTCAAGAAGCAAACAAATGA 735 0.4095 MAPSSSSTSTDQASTKKVRKPYTITKSRESWSDEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTTAHVPPPRPKRKAAHPYPQKAAKNVTWDENSMLMNAESNKLMPCQDELITNLTGNEDDIGSRGIRMPAATEMPNHGKQACVIPGLPDFAEVYSFIGSVFDPDTRGHVHKLKEMDPINFETVLLLMKNLTINLSSPDIEPFKKALSLYDVNTKTVGIECQEANK* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1564 244 MobiDBLite consensus disorder prediction 80 101 - -
Ahy16g1564 244 ProSiteProfiles SANT domain profile. 26 79 IPR017884 -
Ahy16g1564 244 MobiDBLite consensus disorder prediction 1 20 - -
Ahy16g1564 244 PANTHER PROTEIN REVEILLE 8 107 240 - -
Ahy16g1564 244 Gene3D - 31 78 - -
Ahy16g1564 244 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 26 75 IPR006447 GO:0003677
Ahy16g1564 244 ProSiteProfiles Myb-like domain profile. 23 73 IPR001005 -
Ahy16g1564 244 SUPERFAMILY Homeodomain-like 22 78 IPR009057 -
Ahy16g1564 244 PANTHER PROTEIN REVEILLE 8 6 106 - -
Ahy16g1564 244 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 23 77 IPR017930 -
Ahy16g1564 244 Pfam Myb-like DNA-binding domain 28 73 IPR001005 -
Ahy16g1564 244 MobiDBLite consensus disorder prediction 1 32 - -
Ahy16g1564 244 SMART sant 27 75 IPR001005 -
Ahy16g1564 244 PANTHER SWI/SNF COMPLEX-RELATED 6 106 - -
Ahy16g1564 244 PANTHER SWI/SNF COMPLEX-RELATED 107 240 - -
Ahy16g1564 244 CDD SANT 30 73 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1564 Ahy-Chr16 37087678 37090869 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Ahy16g1564 Myb_DNA-binding 3.40E-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1564 - - gmx:100783482 350.517