Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1544 ATGAACGCCAATAGCAGCAGCAATGGAATGCGAATAGCAGCAGCAACACAAATCCAAACCCGAATGCGAACACGAATAGCAGCAGCAACACGAATGCGAGTAGCAGGGGCACAACCGCGATTAGCAGTAGCAATCAATCAATATGTTTTAAAATTTTTAACAAGAAGGGAAGCTTTGACAAACAAGAAAGGAAGCTTTGACAAAATGCTTGCTGATGGAGCCAATGCACAGAACAATGCCATAACTCAATCTTCTGGAAAGGCTGCTGTGTCAATGGCTGCAACTAATCTTAATATTGGAATGGACTTGTGGAATGCATCTTCTGCAGAAGCTGATGCTCCAAAACTGAGAAACAATCAACCTGCCCCAGGAGCTGTCAACCCTCCTACTATAATGGGATGTGAAGTTGCACTTGGTGAACAGTGGATACAAGACGAACGTGACCTGAAGAGACAGAAAAGAAAACAGTCTAACAGAGAATCAGCTAGGAGGTCAAGACTACGCAAGCAGGCTGAGTGCGAGGACTTGCAAAAGAAGGTGGAACTGGGAAACGAGAGCCAGACTCTGAGAGAAGAACTTCAGAGAGTATCAGAAGAATGCGAGAAGCTTACAGCTGAAAATAATTCCATCAAGGAAAAGTTGGAAAGGTTATGTGGACCAGAAGCAGTTGCCAGCCTCGAATAA 684 0.4444 MNANSSSNGMRIAAATQIQTRMRTRIAAATRMRVAGAQPRLAVAINQYVLKFLTRREALTNKKGSFDKMLADGANAQNNAITQSSGKAAVSMAATNLNIGMDLWNASSAEADAPKLRNNQPAPGAVNPPTIMGCEVALGEQWIQDERDLKRQKRKQSNRESARRSRLRKQAECEDLQKKVELGNESQTLREELQRVSEECEKLTAENNSIKEKLERLCGPEAVASLE* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1544 227 SMART brlzneu 146 209 IPR004827 GO:0003700|GO:0006355
Ahy16g1544 227 Gene3D - 149 219 - -
Ahy16g1544 227 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 148 210 IPR004827 GO:0003700|GO:0006355
Ahy16g1544 227 Coils Coil 159 213 - -
Ahy16g1544 227 MobiDBLite consensus disorder prediction 147 170 - -
Ahy16g1544 227 PANTHER G-BOX-BINDING FACTOR 1 56 227 - -
Ahy16g1544 227 SUPERFAMILY Leucine zipper domain 150 201 IPR046347 GO:0003700|GO:0006355
Ahy16g1544 227 Pfam bZIP transcription factor 146 207 IPR004827 GO:0003700|GO:0006355
Ahy16g1544 227 PANTHER G-BOX-BINDING FACTOR 3-RELATED 56 227 IPR044827 GO:0003700|GO:0006355|GO:0043565
Ahy16g1544 227 CDD bZIP_plant_GBF1 151 200 IPR045314 GO:0003700|GO:0006355
Ahy16g1544 227 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 153 168 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1544 Ahy-Chr16 35512010 35513414 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1544 62 227 bZIP Transcription Factor Family AT4G36730 50.299 1.46e-43 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Ahy16g1544 bZIP_1 4.70E-16 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1544 K09060 - gmx:547788 250.751